Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_008954.1 Length=4351 Score E Sequences producing significant alignments: (Bits) Value seq6821 123 7e-25 >seq6821 Length=6314 Score = 123 bits (136), Expect = 7e-25 Identities = 119/149 (80%), Gaps = 8/149 (5%) Strand=Plus/Minus Query 3544 ACAAACTTGTAGATAAAACGCAGAATTTCATTTCCATATACCTACCCCTTATCATAAGCT 3603 ||| |||| | |||||||||||||||||| |||| ||||| ||||||||||||| || Sbjct 6304 ACACACTTCCACATAAAACGCAGAATTTCACTTCC--ATACCCACCCCTTATCATAGGC- 6248 Query 3604 GAGCAGGCTAGATAAGAGCATGTTTACTCCATGAACAGTAATTAGATGCTAATAGATATG 3663 | ||||||| |||||||| ||| ||| ||||||||| ||||| ||||| ||||| Sbjct 6247 --GAAGGCTAGTTAAGAGCACGTTGACT-GATGAACAGTCATTAGGTGCTAGCAGATA-- 6193 Query 3664 ACCTCGTAACTTGACGCTTGGAAAAACAC 3692 |||||| |||| | |||| ||||| ||| Sbjct 6192 GCCTCGTGACTTCATGCTTAGAAAACCAC 6164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13809952093340