Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq5066 118 8e-22 >seq5066 Length=19128 Score = 118 bits (130), Expect = 8e-22 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || ||||| ||||| || ||||| || || || || ||| | | || |||||| Sbjct 19059 ACCAAGTGAAGTGTAGACTCCTTTTGAATATTATAGTC--TGATAGTGTACGACCGTCTT 19002 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||| |||||||| | |||||||||||||| || ||||| ||||| ||||| Sbjct 19001 CAAGTTGCTTGCCAGCAAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCTTTGTCTT 18942 Query 15086 AAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| |||||||| ||| | || |||||||| | ||| || || | || || ||| Sbjct 18941 GAATCTTTGCTTTG-ACATTCTCGATAGTATCCGAAGGTTCAACTTCGAGCGTTATAGTT 18883 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||||| |||||||| || ||||| ||||| Sbjct 18882 TTACCTGTAAGAGTTTTAACGAAAATCTGCAT 18851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357356017438385