Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5066 100 2e-16 >seq5066 Length=19128 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || |||| ||| || || ||||||||| || |||||||||| || || || Sbjct 18837 CGGAGAACCAGATGTAAGGTAGATTCTTTTTGAATGTTATAATCGGATAAGGTTCGACCA 18778 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || || | || || || ||||||| ||||| |||||||| | ||| | |||||||||| Sbjct 18777 TCTTCAAGCTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGGGGAATGCCTTCTTTG 18718 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || || || ||||| | | | || || | ||| || || |||||||| Sbjct 18717 TCTTGAATCTTCGCTTTAACGTTTTCGATGGTATCGGATGGTTCAACTTCTAAAGTAATA 18658 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || |||||||| | ||| || ||||| |||||||| Sbjct 18657 GTCTTACCCGTGAGAGTCTTCACGAAAATCTGCAT 18623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347334626503013