Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3412 475 3e-128 seq1756 224 7e-53 seq1655 208 6e-48 seq944 170 1e-36 seq2293 132 4e-25 seq1898 123 2e-22 seq538 104 2e-16 seq1498 89.7 4e-12 >seq3412 Length=86623 Score = 475 bits (526), Expect = 3e-128 Identities = 995/1466 (68%), Gaps = 20/1466 (1%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| || ||||||||||| || || ||||||||||| | || ||||| || || || Sbjct 72872 GCAGATACGTTAAGAATACCGTTAGCGTCCAAATCAAAAGACACGTCAATCTGTGGCACA 72931 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | |||| || || ||| ||||| ||||||||| | ||| ||||| ||| Sbjct 72932 CCACGTGGAGCTAAAGGAATACCTGTCAAATCAAATGTTCCTAATAAATTGTTATCCTTA 72991 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | || ||| || ||| | | ||| || |||||| | | ||||||||| || ||| Sbjct 72992 GTCATAGCTCTTTCTCCTTCGTAGACTTGAATTGTAACTGCTGGTTGATTATCAGAGTAA 73051 Query 517439 GTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || || || || | || ||||| || | | ||| | |||| ||| || || Sbjct 73052 GTCGTGAAC-CTTTGTGAATGCTTGCAAGGGATCTTCGCGTTACGTTCAACAATGTTTGT 73110 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | ||||| || ||||| | ||| ||||| | |||||||||||||| || | | Sbjct 73111 CATGACTCCACCGGCAGTTTCAATACCTAGAGACAATGGAGTGACATCAACGAGTAAGAC 73170 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 || |||| ||| || | || ||| | ||||| ||||| | || || ||||| Sbjct 73171 ATCCTGAATCTTTGAATGACGTTCACCGCTCAATATAGCAGCTTGTACTGCTGCTCCATA 73230 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 ||| ||||||||||| ||||| | || ||| || ||||||||||| ||||| |||| Sbjct 73231 TGCGACAGCTTCATCGGGATTTATAGACAAATTAAGCTTTTTACCATTAAAAAACTTTGC 73290 Query 517678 AAGA-AG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 || | || ||| || ||||| ||||| | |||||||| ||||||||||| |||| Sbjct 73291 AATAGAGATTGAATT---TTAGGTATACGCGTCGATCCTCCGACTAATACAATGTCATTT 73347 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795 | ||||| ||||| | ||| |||| ||||||| || |||| || | Sbjct 73348 ATAGAACTCTTATCTAGTTTAGCATCGTTTAAAGCTTTTTCTACTGGTTGTAGTGTTATT 73407 Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 517855 | ||| | || || || ||||| ||| ||||||| | || | |||| Sbjct 73408 CGAAATAGATCAGAGTTTAGCTCTTCAAATCGTGCTCTAGATACCCTGGAAAAGAAATCT 73467 Query 517856 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 517915 || || || | |||| || | ||| || ||| || || |||||| || | ||| Sbjct 73468 ATCCCCTCATATAAAGCGTCTATTTCTATATTAGCTTCTGTACTAGAAGAAAGAGTACGC 73527 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--T 517973 || || | ||| ||||||||||| | || | ||||| | ||| | ||| | Sbjct 73528 TTCGCTCTTTCGGCGGCTGTCCTTAGACGACGAAGAGCTTTGGA--ATTAGTAGAAAGAT 73585 Query 517974 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAAT 518033 | |||| | |||||| || || || ||| || | | |||||||| |||| || | Sbjct 73586 CCTTTTTGTGTTTTCTTTTAAATTCATCAGCAAGAAAATTAACAAGACGGCTATCGAAGT 73645 Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTT 518090 |||| ||||| | | ||| | ||||| || || |||||| |||||| || || | Sbjct 73646 CTTCTCCTCCAAGGTGAGTGTCTCCTGCTGTTGCCTTTACTTCAAAAAGTGATCCTTCAT 73705 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || |||| || |||||| || || ||||| | || ||||| | ||||| Sbjct 73706 CAATAGTTAAAATAGAAACATCAAATGTGCCGCCACCAAGGTCGAAAATTAAAACATTTC 73765 Query 518151 TTTCTTTGTCTTGG-TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 | || |||| ||||| || | ||||| || | ||| || ||||| |||||||| Sbjct 73766 TCTCGCC-TCTTAAATTTTTGTCTAAGCCATAAGCCAGAGCCGCTGCAGTAGGTTCATTT 73824 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 ||||| | | |||||||||||||||||| || || |||||||| || ||||| || Sbjct 73825 ATAATACGGAGAACATTAAGACCAGCAATAGAACCAGCGTCTTTAGTAGCCTGTCTCTGC 73884 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 |||||||| ||||| ||||| || ||||| || || | ||| | || | ||| Sbjct 73885 GAATCGTTGAAATAAGCAGGCACTGTAATCACAGCCTTCATTATAGAGGTTCCTAGATAT 73944 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATG-AAATTTGTTCTGGGGAATA 518388 || || ||| |||||||||||| || | || || || || | ||| || | | Sbjct 73945 GCTGCAGCAATTTCTTTCATTTTACTCAAGACCA-TGCTGCTTATCTCTTCCGGAGCGAA 74003 Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448 | || | | || || ||| ||||| | | || || || | |||| || || Sbjct 74004 TCGCCTAGTTTTGCCTTTATACTTAACTTCGATTTTAGGCTTGCCACTATCATTTATCAC 74063 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAA 518507 |||||| ||||| | ||| | |||| |||| ||| || || | ||| | || || | Sbjct 74064 TTTAAAAGGCCAATGTTTAAGATCTTGCTGAA-TCTTAGGATCGTCAAACTTCCTTCCTA 74122 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | | ||||| || ||||| || ||||| | ||||| | || | || | ||| || | Sbjct 74123 TGAGGCGTTTGGCGTCAAATATGGTATTACTAGGATTGAGAGCTACCTGGTTTTTAGCGG 74182 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| ||||| || | || || || || || | |||||||| || || || | |||| Sbjct 74183 CATCACCAATGAGGCGCTCCGTGTCGGTGAACGCTACATATGAAGGCGTCGTTCTGTTAC 74242 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 |||| ||||| |||||||| ||||| ||||||| ||||| || || ||||| | ||| Sbjct 74243 CTTGTTCATTGGCAATAATATCAACATTACCATGCTGCCACACTCCCACACACGAATAAG 74302 Query 518688 TTGTTCCTAAATCAATACCAATAGCA 518713 | || |||||||| || ||||| ||| Sbjct 74303 TCGTACCTAAATCTATTCCAATTGCA 74328 >seq1756 Length=220567 Score = 224 bits (248), Expect = 7e-53 Identities = 835/1295 (64%), Gaps = 18/1295 (1%) Strand=Plus/Plus Query 517238 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 517297 ||||| || ||||| || |||| | || || | ||||| || || || | ||| ||| Sbjct 57852 TTGTTGGTCGATTTTTCGACGGCTGATACGTTTAAGATACCGTTTGCGTCGATATCGAAT 57911 Query 517298 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 517357 || ||||| || ||||| || || | | || || || || ||| || | ||| | Sbjct 57912 GTAACTTCGATCTGAGGAACGCCACGAGGCGCTGGAGGAATACCTGTCAGTTCGAATTTA 57971 Query 517358 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAAC 517416 || || || || || || || | || ||||||||||| | |||||| |||| | Sbjct 57972 CCGAGGAGGTTGTTGTCCTTCGTCATCGCACGCTCACCCTCGAATACTTGGATGAGTA-C 58030 Query 517417 TACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGT 517476 | | ||| ||||| || || || || || | | || || || || || || Sbjct 58031 GCCGGGTTGGTTATCGGAGTATGTGGTGAAGGTTTGAGTTTGCTTGGTGGGGATGGTCGT 58090 Query 517477 GTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGG 517536 ||| | | || | ||||||| | ||| || || || || | ||| || || || || Sbjct 58091 GTTGCGCTTGATCAAGGTGGTCATGACACCGCCGGCGGTCTCAATACCGAGCGACAGCGG 58150 Query 517537 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 517596 |||||| |||| | | | | || | | || | | || | |||||| Sbjct 58151 AGTGACGTCAAGCAATAGCAAGTCCTGGACCTCCTCGGACTTGTCGCCGTGCAAAATAGC 58210 Query 517597 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 517656 ||||| | |||||||| || || || || || ||||| || | | || || || | Sbjct 58211 AGCTTGTACTGCAGCACCGTAAGCGACGGCCTCGTCAGGGTTGATGGATTTGTTGAGCTC 58270 Query 517657 TTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTC 517715 || || ||||| || | | ||| || | ||| ||||| || ||||||| ||||| | Sbjct 58271 CTTGCCGTTGAAGAAGTCTTGAAGGAGCT-TCTGCACCTTGGGGATACGAGTGGATCCAC 58329 Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 |||| | ||| || || || | | ||||| |||| ||| | || | | || | Sbjct 58330 CAACAAGTACGATGTCGTGGATGAGAGATTTGTCCATTTTGGCGTCTCTGAGAGACTTCT 58389 Query 517776 CAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 517835 | ||||| || | | || |||| || | ||||||||||| |||||||| Sbjct 58390 CGACGGGCTCCATGGTGGACCTGAACAGATCAGCGTTCAGTTCTTCGAAACGAGCTCTAG 58449 Query 517836 TAA--GAG-TGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTT 517891 ||| ||| || || || || || || ||||| | |||||| | |||||| | | Sbjct 58450 TAATCGAGGTG----TAGAAGTCGATACCCTCGAAGAGAGAATCGATTTCAATACTGGCC 58505 Query 517892 TGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG 517951 || |||||||| || || | | || || | || || || || || | || || | Sbjct 58506 TGGGTCGAAGACGAAAGAGTTCTCTTCGCCCTCTCGCAGGCAGTTCTCAACCTACGGAGC 58565 Query 517952 GC--TTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACC 518009 || | ||| || | | | | ||| | || || || |||||||| || | || | Sbjct 58566 GCCCTCTTGTTGGTGG--TAAGGTCTTTCTTGTACTTCCTCTTGAATTCCTGGACGAAGT 58623 Query 518010 ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTC 518069 | || | ||| || || || ||||| |||||||| | || | || | || | Sbjct 58624 GATTAACCATACGGTTGTCGAAGTCTTCGCCTCCCAAGTGCGTGTCACCGGCTGTGGACT 58683 Query 518070 TTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCA 518129 | |||| ||| | ||||| || | | || | | || || || ||||| || | Sbjct 58684 TGACTTCGAAGATACCATCCTCGATGGTCAGGATGGACACGTCGAAAGTACCACCGCCGA 58743 Query 518130 TATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAG 518189 ||| |||||||| || || |||| || ||||| |||||||| ||||||| | Sbjct 58744 GATCGAAAATAAGGACGTTACGTTCTCCACCTCCCTTTTTGTCAAGACCGTACGCAATCG 58803 Query 518190 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 518249 |||||||||| |||||||| || |||| | ||| || | |||| || | || |||| Sbjct 58804 CAGCAGCAGTCGGTTCATTGATGATTCGGAGAACGTTCAAGCCAGAGATGGTACCCGCAT 58863 Query 518250 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAG 518309 |||| ||||| |||| ||||| || ||||| || || ||||| ||||| || |||| Sbjct 58864 CTTTTGTGGCCTGTCGCTGTGAGTCATTAAAGTACGCTGGAACCGTAATTACTGCATTTT 58923 Query 518310 TTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATG 518369 || ||| || | ||||| || |||| ||||| || | | || |||||| Sbjct 58924 GCACCGTTTTGCCGAGGTAAGCCTCGGCTGTTTCCTTCATCTTTGTGAGAACCATTGAAC 58983 Query 518370 AAATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGT 518428 | || || |||||| | || |||| ||| || ||||||||| | || | |||| Sbjct 58984 TGACTTCCTC-GGGGAAGAATGTCTTGTCTTCGCCTTTATATGATACCTTAATCTTTGGT 59042 Query 518429 TTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG 518488 ||| ||| || | | |||| ||||||||||| |||||||| | || || | Sbjct 59043 TTACCTCCATCACTGACCACTTCAAATGGCCAGTGCTTCATATCAGCCTGTACGGTGGCA 59102 Query 518489 TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 || | || | | |||||| | |||||| ||||| Sbjct 59103 TCTTCGAATTTGCGACCAATAAGTCGTTTAGCATC 59137 >seq1655 Length=413290 Score = 208 bits (230), Expect = 6e-48 Identities = 515/766 (67%), Gaps = 23/766 (3%) Strand=Plus/Minus Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 517857 ||| || || ||||| | |||||||| ||||| || | | ||| ||||||| Sbjct 55488 AAATAAATCGGAACATAACTCTTCGAACCGTGCTCTTGTTATTTTTGCATAGAAATCAAT 55429 Query 517858 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 517917 ||||| |||| ||| ||||| | ||| || || || |||| | ||||| Sbjct 55428 ACCTTCATGTAAAGCATCTACTTCTAAACTAGCTTCTGTACTCGATGATAACGTTCGTTT 55369 Query 517918 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTG 517976 ||| ||||||||||| || | | ||| | ||||| || | | | || || |||| Sbjct 55368 AGCTCGTTCACATGCGGTTCGCAATCTCCTCAAGGCCTTCGG-GTTACTTTTAATATCTT 55310 Query 517977 TTTTATATTTTCTCTTGAAAT-CTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 518033 |||| || ||| | ||||||| ||| | | ||| | || | |||||||| |||| Sbjct 55309 TTTTGTACTTTTT-TTGAAATTCTTGGCTAAA--ATGATCTACCATTCGATTATCGAAAT 55253 Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 518093 | ||||||||||| | |||| |||| || | | |||| ||| | | ||||| Sbjct 55252 CCTCACCTCCCAAATGTGTATCACCTGCTGTTGACCGCACTTCGAACAAGGAACCTTCA- 55194 Query 518094 GAGA----CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 || | ||||| | ||||| || || ||||| | ||||| |||||||||||| Sbjct 55193 GATATTTGCAAAATTGACACATCGAATGTACCGCCACCGAGGTCAAATATAAGTACATTC 55134 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 ||||| | || | | || || || || || | || ||||| ||||||||||| Sbjct 55133 TTTTCTCCCTTCAAGTCTCTGTCCAGTCCGTAAGCGAGTGCGGCAGCGGTTGGTTCATTG 55074 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || ||||| | ||||| | | ||||||| || || ||||| || ||||||| ||| Sbjct 55073 ATGATTCTTAGCACATTTAAAGCAGCAATAGCACCAGCGTCTTTTGTTGCTTGTCGTTGA 55014 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATAT 518327 | ||| || |||||||| || ||||| ||||| ||||| |||| | | | || | Sbjct 55013 GCATCATTGAAATATGCTGGTACAGTTATAACAGCATCTTTTACAATACCT--CCGA-GG 54957 Query 518328 AAGCGCTTGCCG-TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 ||| | | || || |||||||||| ||| || ||| || ||||||| ||| |||| Sbjct 54956 AAGGTTTCGGCGACTTCTTTCATTTTAGTTAGAACCATAGAAGAAATTTCTTC--GGGAG 54899 Query 518387 TATTGCTTGG--ATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 518444 || || | | |||| || ||| ||| ||| | |||||| | | | || Sbjct 54898 TAAAGCGTCGCTTTTCACCTTTGTATTCAACTACAATTTTAGGTTTACCATTATCCGAAA 54839 Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 518504 | |||| ||||||||||| ||| || ||| ||||| | | |||| ||| | ||||| Sbjct 54838 TGACTTCAAATGGCCAGTGTTTAATGTCTTGTTGAATTTTAGGATCATCAAATTTTCTAC 54779 Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 | ||||| |||||||| || || | ||||| |||| || || || Sbjct 54778 CGATTAAACGTTTTGCGTCGAATACTGTATTTTTTGGGTTCATCGC 54733 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 ||||| || || || || || ||||||||||| || ||| | || |||| |||| | ||| Sbjct 55106 CCGTAAGCGAGTGCGGCAGCGGTTGGTTCATTGATGATTCTTAGCACATTTAAAGCAGCA 55047 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | ||| || |||||||||| || || ||||| ||||||||||||||||| Sbjct 55046 ATAGCACCAGCGTCTTTTGTTGCTTGTCGTTGAGCATCATTGAAATATGCTGGTACAGTT 54987 Query 322364 ATAACTGC 322371 ||||| || Sbjct 54986 ATAACAGC 54979 >seq944 Length=227114 Score = 170 bits (188), Expect = 1e-36 Identities = 438/659 (66%), Gaps = 15/659 (2%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 || || |||||||||||||| | ||| | || || || ||||| || | ||| Sbjct 26177 TCGAAGTCTTCACCTCCCAAGTGAGTGTCACCGTTGGTCGCGACTACTTCAAATACACCA 26118 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | |||| || | ||||| || || ||| |||||||||| ||| || | || || Sbjct 26117 TTGTCAATAGTAAGAAGAGACACGTCGAAGGTACCACCACCCAAATCGAATACGAGCACG 26058 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| |||| |||| |||| |||||||| || || | |||||| ||||| |||||| Sbjct 26057 TTCTTTTCACCTTCTT---TTTTGTCAAGACCGTAGGCGATAGCAGCGGCAGTAGGTTCA 26001 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 ||||| ||||||| ||||||||||| || || || ||||| || || ||||| | Sbjct 26000 TTAATGATTCTCATGACATTAAGACCGGCGATAACACCAGCATCCTT-GTAGCTTGACGC 25942 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || | ||||| || || || || || || | ||||| | || || | || || | Sbjct 25941 TGAGCGTCGTTGAAGTAAGCGGGTACGGTGACGACGGCGTGGGTAACCTTCTTGCCGAGG 25882 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG-- 518384 ||||| || |||| ||||| || ||| | ||| | ||||||| ||| || | Sbjct 25881 TAAGCTTCAGCAGTTTCCTTCATCTTTGTTAGGACCATGGCGGAAATTTCTTCAGGAGCA 25822 Query 518385 AATATTGCTTGGATTCATTTTGATATGAT-ACTTCAAAATATGGTTTATTACCAACATTA 518443 || || || | | || || | | ||| || || ||||| | | | Sbjct 25821 AAGAT---TTTGTCGCCTTGTGCAGTCTTCACTGAAACATGAGGTTTGCTGTTCTTCTCA 25765 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 | |||||| ||||| || |||| | || ||||||| | |||| | | || | | Sbjct 25764 ACAACTTTGAATGGGAAGAATTTGACGTCATGTTGAACAGTGCTGTCACTCCATTCACGA 25705 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG-CAGCTTGATATTT 518562 || || | ||||| |||||||| | ||| || || || | | || | || | || Sbjct 25704 CCGATAAGACGTTTGGCATCAAAGACAGTGTTTTCAGGGTTGGTGGTCAAC-TGGTTCTT 25646 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCT---CTGTAAATGAAACATATGATGGAGTTGT 518619 ||| ||||| ||||| ||| |||| || |||| || | |||||||||||||| | Sbjct 25645 GGCAGCATCACCAATAAGACGTTCGCCCTCAGCTGTGAACGCCACATATGATGGAGTGAT 25586 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 || ||||| || ||||| ||||| ||||| || ||||| | ||||||| |||| Sbjct 25585 ACGGTTACCCTGGTCATTAGCAATGATTTCCACACGTCCATTCTTGTATACACCAACAC 25527 Score = 120 bits (132), Expect = 2e-21 Identities = 325/490 (66%), Gaps = 18/490 (4%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| || | ||| ||||||||||| || | || ||||| ||||||||| Sbjct 26948 TTATCTTCAGCAGATACTTGAAGGATACCATTGGCGTCGATCTCGAATGTTACTTCAATT 26889 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || |||| ||||| | |||||||| || || | || ||| |||| || || | Sbjct 26888 TGTGGGATACCTCTTGGTGCAGGTGGAATACCAGTGAGATCAAACTTTCCGAGTAAATGA 26829 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT---TTGA 517426 || |||||||| | ||||||||||| ||| ||| ||||| ||| || ||| Sbjct 26828 TTGTCTTTAGTCATGGGACGTTCACCCTCATAAACTTGAATAGT---TACGGTGTGTTGG 26772 Query 517427 TTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATC 517485 || || || | |||| |||| |||||||| || || ||||| | | Sbjct 26771 TTGTCACTGGCGGTAGAGAATA-TCTGAGATTTTTTTGTGGGGATGACAGTGTTACGAGG 26713 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 || | || ||||| | ||| || | || || | ||| | | |||||| |||| || Sbjct 26712 GATCAGTTTAGTCATCACACCTCCAACAGTCTCGATACCCATGGTAAGAGGGTTGACGTC 26653 Query 517546 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 517605 | || ||||| | ||| || || ||| || | | | ||||||| Sbjct 26652 GAGGAGCACAATCGCAT-CAGT-----GTCTTGTTCTCCACTGAGGACACCAGCTTGAAC 26599 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 ||||||||||| ||||| ||||||||||| || | | | | | | ||||||||| Sbjct 26598 GGCAGCACCATAGGCAACGGCTTCATCAGGGTTGATACCTCGGGATGGCTCTTTACCATT 26539 Query 517666 GAAAAAAT--TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAAT 517723 ||| || | ||| | || ||| |||||||||||||||| ||| || ||||| | Sbjct 26538 GAAGAACTCCTTG--ACCAGCTGTTGAACCTTAGGAATACGAGTTGAACCACCAACCAGC 26481 Query 517724 ACAATTTCAT 517733 ||||| |||| Sbjct 26480 ACAATCTCAT 26471 >seq2293 Length=188814 Score = 132 bits (146), Expect = 4e-25 Identities = 221/314 (70%), Gaps = 13/314 (4%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 |||||||||||| |||| |||||||| ||||||||||| || ||| ||||||| |||| | Sbjct 114881 TGTACCCTAATTCTGACCGAGGGAGACTCAGCTAAAACTTTAGCTGTGTCTGGACTTAGT 114940 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGA-GGAAAACTTTTGAATGTTAG 635559 ||| |||| ||||| ||||| ||||| || || |||| | || |||| ||| || || || Sbjct 114941 GTTGTTGGCAGAGACTATTACGGAGTATTTCC-CTTAAAGGGTAAACCTTTAAACGTCAG 114999 Query 635560 GGATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCa-aaaaaaTTG 635618 ||||| || ||| | | ||| |||| |||| || | | | | | ||||| Sbjct 115000 AGATGCGTCTCACAAACAGGTCCATGAAAATGTCGAAA-TAAATAACTTAGTACAAATTT 115058 Query 635619 TTGGACTTGA--ACAAGGAAAAGTTTA-------TGATGATCTCAAAGGTTTACGATATG 635669 | || || | |||| | || | || ||| ||| | ||| || |||| | Sbjct 115059 TAGGTCTACAATACAAAAAGAAATATAATTCAGTTGACGATTTGAAATCATTGAGATACG 115118 Query 635670 GTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCA 635729 ||| | ||||| | || ||||| ||| || || | |||||||||||| | |||| Sbjct 115119 GTAAAGTAATGATAATGGCCGATCAGGATCAAGACGGTTCGCATATCAAAGGACTTATCA 115178 Query 635730 TGAATTTTATCCAT 635743 | |||||||||||| Sbjct 115179 TTAATTTTATCCAT 115192 >seq1898 Length=134552 Score = 123 bits (136), Expect = 2e-22 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 870798 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 870857 |||| || |||| || || ||||| ||||| |||||||||||| |||| |||||||| | Sbjct 118240 TTATAGTGGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTTGGCCATTTAAGGT 118181 Query 870858 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 870917 |||||||||||||||| |||||| | || |||||| | | || ||||| | Sbjct 118180 CAACTATTATTGGTGACAGCATTTGTCGTGTTTTAGAATTTTTAAATCATGATGTGCTCC 118121 Query 870918 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 | |||| ||| | || |||||||| || ||||| |||||| | |||||| || Sbjct 118120 GCCTTAACCATCTTGGAGATTGGGGCACACAATTTGGTATGCTCATTGCTCAT 118068 >seq538 Length=46986 Score = 104 bits (114), Expect = 2e-16 Identities = 626/986 (63%), Gaps = 52/986 (5%) Strand=Plus/Minus Query 399803 TGTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTCG 399862 |||||| || ||| |||| |||||| |||| ||||||||| || ||| | Sbjct 42348 TGTTAATATGTTTGTTGAAAATAAAACTTTTAATTTTCAAAAATTAAAACAGGTTACTAA 42289 Query 399863 TATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAAC 399922 | | | || | ||| | ||||| |||||||| |||| |||||||| | || | Sbjct 42288 AACTGTTACACAAAATTTAAATAAGATTATTGATGTTAACTTCTATCCAGTGCCAGAAGC 42229 Query 399923 TCGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTAGCTGATGT 399982 || | | ||| | || | |||||||| || || |||||||||||||| |||| Sbjct 42228 AAAGAATTCGAATATGAAACATAGGCCTATTGGCATCGGTGTTCAGGGATTAGCAGATGC 42169 Query 399983 ATTTGCTATGTTTAAGAC---TCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTAA 400039 ||||| |||| | || ||| | ||| ||| || | || |||| | Sbjct 42168 ATTTG---TGTTAATGAGATTTCCCTATGAGAGTGAAGAAGCAATTTTACTTAATCAACA 42112 Query 400040 AATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAA--ACTTGCTAGAGAA 400097 ||| || ||||| || || |||||||||||| ||| | | | | ||| |||||| Sbjct 42111 AATATTTGAAACTATATACTATGGAGCTTTA---GAAGCTAGTTGTGAATTGGCAGAGAA 42055 Query 400098 TTT-GGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGA 400156 ||| || | |||| | ||||||||| |||||| | || |||| ||| Sbjct 42054 GGAAGGTGTTTACTCTAGTTATGATGGAAGTCCTGCAAGTCAAGGCATTTTACAATATGA 41995 Query 400157 TCTTTGGAATTTCGATAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCA 400216 | ||| | | | || | | ||| | ||||||||||| ||| || | | Sbjct 41994 CATGTGGGAC----AAGACTC-CTACTGATC----TGTGGGATTGG--ACT---GCCTTA 41949 Query 400217 AGA----AATTTTAAATCATGGTGTTCGTAATAGTCTA--GTTACAACCTGTATGCCAAC 400270 | | |||| ||| |||||| |||||||| || |||| || |||||||| Sbjct 41948 AAAGAAAAATTGCAAAGCATGGTCTTCGTAATTCCCTTTTGTTAGCTCCA--ATGCCAAC 41891 Query 400271 TGCAAGTACTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATAT 400330 ||| || | || || | ||| ||||||| | ||||||| | ||| ||| || Sbjct 41890 TGCTTCCACAGCACAGATACTTGGAAATAATGAATCTTTTGAACCATTTACTTCAAACAT 41831 Query 400331 TTATTCAAGAAG--TACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAA 400388 ||| | | | || ||| |||| || | | || |||| | |||||| ||| | Sbjct 41830 TTACCAACGCCGGGTATTAT--CTGGTGAGTTTCAAGTTGTTAACCATCATCTCTTAACA 41773 Query 400389 GATCTTATTGA-GTTGGGTGTATGGAATTCAGAAATGGTTGATCTTATTAAATATTACAA 400447 ||| | | | | || | ||||| || ||| ||| || | || | | |||| Sbjct 41772 GATTTAACCCAAGCTGACT-TATGGGATGAAGATATGAAAAATTTGATAATTCACAACAA 41714 Query 400448 AGGATCTGTTGCTAATATTCCGAATATTCCAGACAACATTAAAGCTATTTACCGGACTGT 400507 |||||| | |||||| || |||||| | || || | | | ||| ||| || Sbjct 41713 TGGATCTATACAAAATATTGAAAAGATTCCAAAAAAAATAAGGGACTTATACAAGACAGT 41654 Query 400508 TTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCTGATAGAGCACCTTTTGTTGA 400567 |||||||||| | ||| | | || ||||||| || ||||||| | | ||| |||| Sbjct 41653 TTGGGAAATTTCAGTGAAAACAACTATACAAATGGCTGCAGATAGAGGAGCGTTTATTGA 41594 Query 400568 TCAAACTCAGAGTATGAATTTGTACATTGATAAACCTAGTTTTGCAAGATTAAATTCTTG 400627 ||| | |||| | ||| | | | | | |||| | || || || ||||| ||| Sbjct 41593 TCAGAGTCAGTCATTTAATATTCATGTAGCTGAACCAAATTATGGAAAATTAACATCTAT 41534 Query 400628 TCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATGTATTATTTGAGATCTAAACC 400687 | || ||||| |||| || || | ||||| || ||||| ||||| | ||||||| Sbjct 41533 ACATTTCTATGCTTGGAAGATGGGATTGAAAACTGGAATGTACTATTTACGTACTAAACC 41474 Query 400688 AGCTTCTTCCGCCAATCAATTCGGAATTGACATCGATAAAATCAAAGAAATTGAATCCAA 400747 |||| || || | |||||| | || | ||||| | |||| || || | || Sbjct 41473 AGCTGCTAATGCTATTCAATT---TACTG---TTGATAAGACTAAAG---TTAAAGCTAA 41423 Query 400748 AAATGGT--ATTA-AAAAACAAGAAG 400770 ||||||| |||| ||||| |||||| Sbjct 41422 AAATGGTAAATTAGAAAAAGAAGAAG 41397 >seq1498 Length=44334 Score = 89.7 bits (98), Expect = 4e-12 Identities = 177/256 (69%), Gaps = 7/256 (3%) Strand=Plus/Plus Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 || |||| ||||||||||||||||||||| |||| | || |||| || | | || | Sbjct 24815 GTCACAATACGATTATCAAAATCTTCACCCCCCAGTCTAATATTACCAGTGGCTGCCTTC 24874 Query 518072 ACTTGGAAAAGTCCATCTT---CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCC 518128 |||||| | | ||||| ||| | ||||| | |||||| || ||||| || Sbjct 24875 ACTTGGTACACAGTATCTTGACCAATATTCAAAATGGACACATCAAATGTCCCACCTCCT 24934 Query 518129 ATATCAAAAATAAGTACATTCATTT-CTTTGTCTTGGTTTTTATCAAGACCATACGCAAA 518187 | |||| | | |||||| ||| ||| | || | | |||| | || ||||| || Sbjct 24935 AAATCATAGACAAGTACGTTCTTTTCCCCACTCAT-ATCCTTATTTAAGCCGTACGCTAA 24993 Query 518188 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT-TAAGACCAGCAATTCTTCCTG 518246 ||| || ||||| ||||||||||| || || | ||| | |||| ||||| || || | Sbjct 24994 AGCGGCGGCAGTCGGTTCATTAATTATCCTAATAACTTCTAAG-CCAGCGATCTGACCGG 25052 Query 518247 CATCTTTAGTGGCTTG 518262 || || |||||||| Sbjct 25053 CAAACTTTGTGGCTTG 25068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780412461968266