Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3412 273 2e-67 seq3177 167 2e-35 seq4408 154 1e-31 seq1655 145 6e-29 seq1756 134 1e-25 seq5066 125 6e-23 seq944 118 9e-21 seq733 109 4e-18 seq2293 102 7e-16 >seq3412 Length=86623 Score = 273 bits (302), Expect = 2e-67 Identities = 548/807 (68%), Gaps = 13/807 (2%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGT-GTTGA 551848 ||||| |||| ||||| || ||||| || |||| | || || | || | | | ||| Sbjct 73670 GGAGACACTCACCTTGGAGGAGAAGACTTCGATAGCCGTCTTGT-TAATTTTCTTGCTGA 73612 Query 551849 AGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCT 551908 || |||||| ||||| ||||| ||||| ||||| | ||||||||||||||||||| Sbjct 73611 TGAATTTAAAAGAAAACACAAAAAGGATCTTTCTACTAATTCCAAAGCTCTTCGTCGTCT 73552 Query 551909 AAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGA 551968 ||| || || ||||||||| || || ||||||| ||| |||| || | | ||| || Sbjct 73551 AAGGACAGCCGCCGAAAGAGCGAAGCGTACTCTTTCTTCTAGTACAGAAGCTAATATAGA 73492 Query 551969 AGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGA 552028 | |||| | |||| |||||| || |||| | | | || || || |||||| Sbjct 73491 AATAGACGCTTTATATGAGGGGATAGATTTCTTTTCCAGGGTATCTAGAGCACGATTTGA 73432 Query 552029 AGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGA 552088 ||| | |||||||| ||| ||| |||| | ||||||||||| ||| ||||| || Sbjct 73431 AGAGCTAAACTCTGATCTATTTCGAATAACACTACAACCAGTAGAAAAAGCTTTAAACGA 73372 Query 552089 TTCAAAGATTGATA--AATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 | | || | |||| | | | | || |||| ||||| | || || ||||| || | Sbjct 73371 TGCTAAACTAGATAAGAGTTCTA--TAAATGACATTGTATTAGTCGGAGGATCGACGCGT 73314 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAA 552203 || |||||||||| ||| | | | | | ||| ||||||||||| | ||| Sbjct 73313 ATACCTAAAATTC----AATCTCTATTGCAAAGTTTTTTAATGGTAAAAAGCTTAATTTG 73258 Query 552204 AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT 552263 | | ||||| ||||| ||||| || ||||| || ||| | ||||| ||||| | Sbjct 73257 TCTATAAATCCCGATGAAGCTGTCGCATATGGAGCAGCAGTACAAGCTGCTATATTGAGC 73198 Query 552264 GGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || || | || ||| | || || | |||| || ||||| ||||| | ||||| Sbjct 73197 GGTGAACGTCATTCAAAGATTCAGGATGTCTTACTCGTTGATGTCACTCCATTGTCTCTA 73138 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||| | ||||| | || || | ||||| || || | || | || | | || ||| Sbjct 73137 GGTATTGAAACTGCCGGTGGAGTCATGACAAACATTGTTGAACGTAACGCGAAGATCCCT 73078 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || || | || | || | || || || ||||||||| | || |||||||||||| Sbjct 73077 TGCAAGCATTCACAAAGGTTCACGACTTACTCTGATAATCAACCAGCAGTTACAATTCAA 73018 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | | |||||||||||| | ||||| ||||| ||| | | || || ||| |||| Sbjct 73017 GTCTACGAAGGAGAAAGAGCTATGACTAAGGATAACAATTTATTAGGAACATTTGATTTG 72958 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 |||||||||| ||||| ||||| || || || ||||| || |||| ||| | || Sbjct 72957 ACAGGTATTCCTTTAGCTCCACGTGGTGTGCCACAGATTGACGTGTCTTTTGATTTGGAC 72898 Query 552564 GCCAATGGAATTTTGAATGTGACTGCT 552590 || || || ||| | || || ||||| Sbjct 72897 GCTAACGGTATTCTTAACGTATCTGCT 72871 Score = 233 bits (258), Expect = 2e-55 Identities = 386/554 (70%), Gaps = 10/554 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || ||||||||||| || || ||| ||||| || || ||||| ||||||| Sbjct 74327 GCAATTGGAATAGATTTAGGTACGACTTATTCGTGTGTGGGAGTGTGGCAGCATGGTAAT 74268 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| |||||||||||||| |||||||||||||| || || || ||||| | ||||| Sbjct 74267 GTTGATATTATTGCCAATGAACAAGGTAACAGAACGACGCCTTCATATGTAGCGTTCACC 74208 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | |||||||||| || ||| | || | || ||||||| ||| Sbjct 74207 GACACGGAGCGCCTCATTGGTGATGCCGCTAAAAACCAGGTAGCTCTCAATCCTAGTAAT 74148 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||| || ||||| | || ||||| | ||| | ||| | | ||||| | Sbjct 74147 ACCATATTTGACGCCAAACGCCTCATAGGAAGGAAGTTTGACGATCCTAAGATTCAGCAA 74088 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||| | || ||||||||||| || | | |||| | ||| || ||| | || |||| | Sbjct 74087 GATCTTAAACATTGGCCTTTTAAAGTGATAAATGATAGTGGCAAGCCTAAAATCGAAGTT 74028 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTTTAAT 550350 | || |||| || | ||| | || ||| | || || | ||||| || | Sbjct 74027 AAGTATAAAGGCAAAACTAGGCGATTCGCTCCGGAAGAGATAAGCAGC-ATGGTCTTGAG 73969 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGG----TCAAGAAGTTACGGATGCAGTAA 550406 ||||||||| ||| || || | | | || || | | | | | || || | Sbjct 73968 TAAAATGAAAGAAATTGCTGCAGCATATCTAGGAACCTCTA----TAATGAAGGCTGTGA 73913 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || || || ||||| || || || || | || ||||||||||| ||||| || Sbjct 73912 TTACAGTGCCTGCTTATTTCAACGATTCGCAGAGACAGGCTACTAAAGACGCTGGTTCTA 73853 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| ||||||||||| |||||||| |||||||||||||| || || || || |||| Sbjct 73852 TTGCTGGTCTTAATGTTCTCCGTATTATAAATGAACCTACTGCAGCGGCTCTGGCTTATG 73793 Query 550527 GACTTGATAAACAT 550540 | | || ||| || Sbjct 73792 GCTTAGACAAAAAT 73779 >seq3177 Length=92477 Score = 167 bits (184), Expect = 2e-35 Identities = 368/547 (67%), Gaps = 5/547 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | ||||| ||||| ||||| |||||||||||| |||| || Sbjct 62955 GCTATTGGAATTGATCTTGGAACAACATACTCCTGTGTCGGTGTTTGGCAACATGGAAAC 63014 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||||| || || || ||||| ||||| || || ||||| || ||| |||||||| Sbjct 63015 GTGGAAATTATCGCAAACGACCAAGGCAACAGGACGACACCATCATACGTTGCTTTCACG 63074 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | | || ||||| || || | || | | | || || | ||| Sbjct 63075 GACACAGAGCGTCTTATCGGCGATGCTGCGAAGAACCAGGTCGCGTTGAACCCCAACAAC 63134 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| ||||| ||| | | || ||| | | || |||| ||| |||| Sbjct 63135 ACAGTTTTCGATGCGAAAAGGCTGATCGGACGCAAATTCGATGACCCGAAAATTCAACAG 63194 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290 || |||||||||||||||||| || | || | | | || ||||| | || | | | Sbjct 63195 GACATGAAGCATTGGCCTTTCAAAGTCGTCAGCGACTGCGGCAAACCGAAGATCCAGGTC 63254 Query 550291 TA-CTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | ||| |||| | || || | |||||| |||| |||||| || | Sbjct 63255 GAGTTCA--AAGGTGAAATGAAGAGGTTCGCGCCAGAAGAAATAAGCAGTATGGTATTGA 63312 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 ||| ||||| | ||||| || | | | ||| ||| ||| || || || | Sbjct 63313 CGAAGATGAAGGAGACAGCGGAGGCCTATCTCGGTACGTCAGTACGGGACGCCGTTATCA 63372 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || || || || || || |||||||| | || || || || ||||||||| ||| | Sbjct 63373 CAGTGCCCGCTTACTTCAACGACTCACAGAGACAGGCCACGAAGGATGCTGGAGCTATCG 63432 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 |||| | || || ||||| || ||||| ||||| ||||| |||||||| || || || | Sbjct 63433 CTGGTTTGAACGTCCTTCGAATCATCAACGAACC-ACTGCAGCTGCACTAGCGTACGGTC 63491 Query 550530 TTGATAA 550536 | || || Sbjct 63492 TGGACAA 63498 >seq4408 Length=116492 Score = 154 bits (170), Expect = 1e-31 Identities = 251/353 (71%), Gaps = 14/353 (4%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 ||| || ||||| |||||||||||||| |||||||| |||| ||||| || |||||||| Sbjct 93133 AGTATTTGATTGTTGGTTTGAATCAGGATCTATGCCCTATGCTCAAAGTCACTATCCATT 93192 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 ||| || |||| | |||||| | ||| || | ||| |||| || | || Sbjct 93193 TGAAAATAAAAAAGAGTTTGATGA-GAT-----TTTTCCTGCTAATTTCGTTGCTGAGGG 93246 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 || ||||||||| | || ||||||||||| || | || |||| |||||| | || | Sbjct 93247 CATAGATCAAACAAGAGGGTGGTTTTATACACTGATTGTGCTATCTACAGCTTTGTTTAA 93306 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAAT-GCATCTGATGGTCAAA 369031 |||||| | || |||||| |||||| | ||| |||| | | |||||||||||||||| Sbjct 93307 TAAACCCCCATTCAAAAATTTAATAGCTAATGG-ATTGATCTTGGCATCTGATGGTCAAA 93365 Query 369032 AGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATA-TTTTAATTGATAAATTTGGT 369090 | ||||| || | ||| || ||| | ||||| | || || | ||||| ||| Sbjct 93366 AAATGTCTAAGAAAAAGAAAAACTATCCAGATCC-ATTAGAAGTAGTAACTAAATATGGA 93424 Query 369091 GCTGATACTTTGAGATTATACCTATTGTCA--TCACCTGTAGTAAAAGCAGAA 369141 |||||| | || ||| | || | |||| | || || || || ||||| ||| Sbjct 93425 GCTGATGCATTAAGACTCTA--TCTTGTAAATTCTCCAGTTGTTAAAGCCGAA 93475 >seq1655 Length=413290 Score = 145 bits (160), Expect = 6e-29 Identities = 256/370 (69%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 ||||| | || || || ||||||||||| || |||| ||| ||||| | | |||| Sbjct 54748 AATACAGTATTCGACGCAAAACGTTTAATCGGTAGAAAATTTGATGATCCTAAAATTCAA 54807 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||| || || || ||||| || || | || | | ||| |||||| | |||| | Sbjct 54808 CAAGACATTAAACACTGGCCATTTGAAGTCATTTCGGATAATGGTAAACCTAAAATTGTA 54867 Query 550289 GCTACTCATGAAGGATCTGTTAAACAA---TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | | |||| || || | | ||| | || ||| ||||||| ||||||||| Sbjct 54868 GTTGAATACAAAGG---TGAAAAGCGACGCTTTACTCCCGAAGAAATTTCTTCTATGGTT 54924 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAG 550403 ||| ||||||||| || ||| | || | || | | | || | ||||| | Sbjct 54925 CTAACTAAAATGAAAGAAGTCGCCGAAACCTTCCTCGG--AGGTATTGTAAAAGATGCTG 54982 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| Sbjct 54983 TTATAACTGTACCAGCATATTTCAATGATGCTCAACGACAAGCAACAAAAGACGCTGGTG 55042 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | ||||| || | || ||||||||||| || ||||| ||||| || | Sbjct 55043 CTATTGCTGCTTTAAATGTGCTAAGAATCATCAATGAACCAACCGCTGCCGCACTCGCTT 55102 Query 550524 ATGGACTTGA 550533 | ||||| || Sbjct 55103 ACGGACTGGA 55112 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || |||||| ||||||| || ||| |||||||| || | | || |||||||| Sbjct 54445 GGAATAGATCTAGGAACGACTTATTCCTGTGTTGGAGTATTTATGCACGGAAAAGTTGAG 54504 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA-AAC 550116 || || ||||| || ||||||||||||||||| || || ||||| | |||| || ||| Sbjct 54505 ATAATCGCCAACGACCAAGGTAACAGAACTACGCCTTCGTATGTAGCCTTCAATGATAAC 54564 Query 550117 TGAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 || | ||| | || |||||||||||| |||| Sbjct 54565 GAAAGACTTA-TCGGAGATGCAGCAAAAAATCA 54596 >seq1756 Length=220567 Score = 134 bits (148), Expect = 1e-25 Identities = 272/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||||||||| | ||||| | | || | ||| | || || ||||| ||||||||| Sbjct 59137 GATGCTAAACGACTTATTGGTCGCAAATTCGAAGATGCCACCGTACAGGCTGATATGAAG 59078 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA-CTCATGA 550299 || ||||| || || | || | || | || ||||| | ||| ||| || | || | Sbjct 59077 CACTGGCCATTTGAAGTGGTCAGTGATGGAGGTAAACCAAAGATT-AAGGTATCATATAA 59019 Query 550300 AGGATCTGTTAA-ACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGA 550358 ||| | || ||| | ||| || || || | || |||||| | | || |||| Sbjct 59018 AGGCGAAGACAAGACATTCTTCCCC-GAGGAAGTCAGTTCAATGGTTCTCACAAAGATGA 58960 Query 550359 AACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGA-TGCAGTAATAACTGTACCA 550417 | |||||||| |||| | || ||| | | | | | ||||||||| || || ||| Sbjct 58959 AGGAAACAGCCGAGGCTTACCTCGG-CAAAACGGTGCAAAATGCAGTAATTACGGTTCCA 58901 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || |||||||||||||| || || || || |||||||| || || |||| | Sbjct 58900 GCGTACTTTAATGACTCACAGCGACAGGCCACAAAAGATGCGGGTACCATCTCTGGCTTG 58841 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || ||||| || || ||||||||||| ||||||||||| |||| || || ||||| ||| Sbjct 58840 AACGTTCTCCGAATCATCAATGAACCGACTGCTGCTGCGATTGCGTACGGTCTTGACAAA 58781 Query 550538 CATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | | | ||||| ||| || || || || ||| Sbjct 58780 AAGGGAGGTGGAGAACGTAACGTCCTTATTTTCGAT 58745 >seq5066 Length=19128 Score = 125 bits (138), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| ||||| | ||||| ||| || || |||||| || || | ||| || | Sbjct 19069 GAGACGAAGTACCAAGTGAAGTGTAGACTCCTTTTGAATATTATAGTCTGATAGTGTACG 19010 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||||||||| || || ||||| || | | || ||||| || ||||| ||||| Sbjct 19009 ACCGTCTTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTC 18950 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| |||||||| ||| ||| || ||| || ||||| | | | |||||| || Sbjct 18949 TTTGTCTTGAATCTTTGCTTTGACATTCTCGATAGTATCCGAAGGTTCAACTTCGAGCGT 18890 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||| |||||||||||||||||||| ||||| Sbjct 18889 TATAGTTTTACCTGTAAGAGTTTTAACGAAAATCTGCAT 18851 >seq944 Length=227114 Score = 118 bits (130), Expect = 9e-21 Identities = 305/461 (66%), Gaps = 8/461 (2%) Strand=Plus/Plus Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT-AAGT 552173 |||| |||||||| |||||||| || || | |||||||| ||| | || | ||| Sbjct 26471 ATGAGATTGTGCTGGTTGGTGGTTCAACTCGTATTCCTAAGGTTCAACAGCTGGTCAAGG 26530 Query 552174 TCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTAT 552233 || || |||||||||| | | | || | || || ||||| || ||||||||| Sbjct 26531 AGTTCTT-CAATGGTAAAGAGCCATCCCGAGGTATCAACCCTGATGAAGCCGTTGCCTAT 26589 Query 552234 GGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATT 552293 ||||| || ||||||| | | | || |||| || || ||| | ||| Sbjct 26590 GGTGCTGCCGTTCAAGCTGGTGTCCTCAGTGGAGAACAAGAC-----ACTG-ATGCGATT 26643 Query 552294 GTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 || || | || || | ||||| | | ||| | || || ||||||||| | |||||| Sbjct 26644 GTGCTCCTCGACGTCAACCCTCTTACCATGGGTATCGAGACTGTTGGAGGTGTGATGACT 26703 Query 552354 AATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTAT 552413 || || ||| | | || ||| || || |||||||||| |||| ||||| Sbjct 26704 AAACTGATCCCTCGTAACACTGTCATCCCCACAAAAAAATCTCAGATATTCTCTACCGCC 26763 Query 552414 TCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAA 552473 || || ||| | || || |||||| ||| ||| || ||| | | |||||| Sbjct 26764 AGTGACAACCAACACACCGTAACTATTCAAGTTTATGAGGGTGAACGTCCCATGACTAAA 26823 Query 552474 GATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTA 552533 || ||| || ||| || | ||| || | |||||||| ||||| || | || | Sbjct 26824 GACAATCATTTACTCGGAAAGTTTGATCTCACTGGTATTCCACCTGCACCAAGAGGTATC 26883 Query 552534 CCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 || ||||||||||| || ||||| ||||| |||||||| || Sbjct 26884 CCACAAATTGAAGTAACATTCGAGATCGACGCCAATGGTAT 26924 Score = 104 bits (114), Expect = 2e-16 Identities = 159/223 (71%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | || ||| ||||||| | ||||| ||| || ||||| |||| || ||| Sbjct 25820 TTTGCTCCTGAAGAAATTTCCGCCATGGTCCTAACAAAGATGAAGGAAACTGCTGAAGCT 25879 Query 550376 TTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 | | || ||||||| |||| | || || | || ||||| || || || || ||| | Sbjct 25880 TACCTCGG-CAAGAAGGTTACCCACGCCGTCGTCACCGTACCCGCTTACTTCAACGACGC 25938 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTAT 550494 || ||||||||||| || |||||||| ||| || || |||||||| | | || || Sbjct 25939 TCAGCGTCAAGCTAC-AAGGATGCTGGTGTTATCGCCGGTCTTAATGTCATGAGAATCAT 25997 Query 550495 CAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 |||||||||||||| ||||| | || || || ||||| ||| Sbjct 25998 TAATGAACCTACTGCCGCTGCTATCGCCTACGGTCTTGACAAA 26040 >seq733 Length=158335 Score = 109 bits (120), Expect = 4e-18 Identities = 188/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||||| ||||| || ||| ||||| || || |||||| |||| || Sbjct 49562 AGCAATTGGAATTGATTTGGGAACGACGTATTCATGTGTGGGAGTCTGGCAACATGGAAA 49503 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || || || ||||| ||||| |||||||||||||| || ||||| | ||||| Sbjct 49502 CGTGGAGATCATCGCAAATGACCAAGGAAACAGAACTACTCCGTCATATGTCGCGTTCAC 49443 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || |||| | | || || || || || | || | | || || |||| ||| Sbjct 49442 GGACACCGAACGACTCATCGGCGACGCGGCGAAGAACCAGGTCGCTCTAAACCCTAACAA 49383 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || || || || || | || || | | || | ||| ||| ||||| Sbjct 49382 CACAGTGTTCGACGCGAAGCGCCTGATCGGCCGCAAGTTCGACGATCCGAAGATTCAGCA 49323 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAA 550263 || ||| |||| ||||| ||| || |||| || Sbjct 49322 GGACATGCAGCACTGGCCCTTCAAAGTTGTCAA 49290 >seq2293 Length=188814 Score = 102 bits (112), Expect = 7e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 429293 ACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACATTT 429352 || || || ||||| ||||| | |||||||| || ||||| |||| |||| |||| | Sbjct 114996 ACGTTTAAAGGTTTACCCTTTAAGGGAAATACTCCGTAATAGTCTCTGCCAACAACACTA 114937 Query 429353 AGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACA 429408 |||||||||| || |||||||||||||| ||||| || |||| ||| || ||||| Sbjct 114936 AGTCCAGACACAGCTAAAGTTTTAGCTGAGTCTCCCTCGGTCAGAATTAGGGTACA 114881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028859121062890