Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1957 129 1e-24 >seq1957 Length=467265 Score = 129 bits (142), Expect = 1e-24 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| ||||| || ||||| ||||| || || ||||| ||| || || Sbjct 419049 GTACATCTCTGAGTGTACATTTTCCATAGCAATCTGAAAGCCATAGAAACACCTAGCTTC 418990 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||||||||||||| || || | |||| || |||||||||||||| |||||||| Sbjct 418989 TGTCACCTGCACTTCTTGTGAAAAGCGTTCCACAAGGTTCTCATTGACTATGCCATCTGA 418930 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATG 48579 ||||||||||| || | ||||| |||| |||||| Sbjct 418929 TGCAGCAAAGAACGCTAATACATGCTTAATGAAATG 418894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931436607594240