Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3412 237 1e-56 seq538 210 1e-48 seq5066 156 3e-32 seq3177 152 3e-31 seq4408 150 1e-30 seq1756 145 5e-29 seq1655 143 2e-28 seq733 122 6e-22 seq944 113 3e-19 seq1898 96.9 2e-14 seq1859 96.9 2e-14 seq287 87.8 1e-11 >seq3412 Length=86623 Score = 237 bits (262), Expect = 1e-56 Identities = 406/584 (70%), Gaps = 4/584 (1%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||||||||| || |||||||| || ||||| ||||| | || ||||| ||||||| Sbjct 74328 TGCAATTGGAATAGATTTAGGTACGACTTATTCGTGTGTGGGAGTGTGGCAGCATGGTAA 74269 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || || || ||||||||||| |||||||| ||||| || || |||||||| | || || Sbjct 74268 TGTTGATATTATTGCCAATGAACAAGGTAACAGAACGACGCCTTCATATGTAGCGTTCAC 74209 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTA 474506 || || || | || ||||| ||||| |||||| | || | || ||| |||||| || Sbjct 74208 CGACACGGAGCGCCTCATTGGTGATGCCGCTAAAAACCAGGTAGC-TCTCAATCCTAGTA 74150 Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566 |||| || ||||| || ||| | | || || | || ||||| ||| | | | || Sbjct 74149 ATACCATATTTGACGCCAAACGCCTCATAGGAAGGAAGTTTGACGATCCTAAGATTCAGC 74090 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 ||| | |||||||||||||| |||||||||| | |||| || || | || |||| Sbjct 74089 AAGATCTTAAACATTGGCCTTTTAAAGTGATAAATGATAGTGGCAAGCCTAAAATCGAAG 74030 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | ||| |||||| | ||| | |||||| | || ||||| || Sbjct 74029 TTAAGTATAAAGGCAAAACTAGGCGATTCGCTCCGGAAGAGATAAGCAGCATGGTCTTGA 73970 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||||||||| ||| || ||||||| ||| ||| | || || |||| Sbjct 73969 GTAAAATGAAAGAAATTGCTGCAGCATATCTAGGAACCTCTATAATGAAGGCTGTGATTA 73910 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 | || || || ||||| || ||||| || | || || |||||||| || || |||| Sbjct 73909 CAGTGCCTGCTTATTTCAACGATTCGCAGAGACAGGCTACTAAAGACGCTGGTTCTATTG 73850 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | |||||||||||| | |||||||| |||||||| || ||||| || || |||||||| Sbjct 73849 CTGGTCTTAATGTTCTCCGTATTATAAATGAACCTACTGCAGCGGCTCTGGCTTATGGCT 73790 Query 474867 TTGATAAGAATTCTGACA-AAGAAGTAAATGTTTTAATCTTTGA 474909 | || || |||| | | | || |||||||||||| || || Sbjct 73789 TAGACAAAAATT-TAAGAGGCGAGAGAAATGTTTTAATTTTCGA 73747 Score = 233 bits (258), Expect = 1e-55 Identities = 551/821 (67%), Gaps = 11/821 (1%) Strand=Plus/Minus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTA 475417 |||| |||||||| ||||| | || ||||| || ||||| || |||| | ||||| Sbjct 73685 GTAAAGGCAACAGCAGGAGACACTCACCTTGGAGGAGAAGACTTCGATAGCCGTCTTGT- 73627 Query 475418 TCATGGTGT-GTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAA 475476 | || | | | ||| || || || || ||| | ||| |||||||| || | | || Sbjct 73626 TAATTTTCTTGCTGATGAATTTAAAAGAAAACACAAAAAGGATCTTTCTACTAATTCCAA 73567 Query 475477 AGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTAC 475536 ||| | | ||||| || || || ||| | || ||||| ||||||||||| ||| Sbjct 73566 AGCTCTTCGTCGTCTAAGGACAGCCGCCGAAAGAGCGAAGCGTACTCTTTCTTCTAGTAC 73507 Query 475537 TCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTAC 475596 || ||| | | ||| | || || | | ||| || || |||| | | | | Sbjct 73506 AGAAGCTAATATAGAAATAGACGCTTTATATGAGGGGATAGATTTCTTTTCCAGGGTATC 73447 Query 475597 AAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGA 475656 || || ||||||||| | |||||||| ||| ||| |||| | |||| || || Sbjct 73446 TAGAGCACGATTTGAAGAGCTAAACTCTGATCTATTTCGAATAACACTACAACCAGTAGA 73387 Query 475657 ACAAGTTCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAG 475715 | ||| | | | ||| ||||||| || || | | | | |||| ||||| | || | Sbjct 73386 AAAAGCTTTAAACGATGCTAAACTAGATAAGAGTTCTA-TAAATGACATTGTATTAGTCG 73328 Query 475716 GAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775 |||| || || | || || ||||| | | || || | |||||||||||||| Sbjct 73327 GAGGATCGACGCGTATACCTAAAATTCAATCTCTA-TTGCAAAGTTTTTTAATGGTAAAA 73269 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 || | ||| | ||||||| ||||||||||| ||||||||||| || || ||||| | Sbjct 73268 AGCTTAATTTGTCTATAAATCCCGATGAAGCTGTCGCATATGGAGCAGCAGTACAAGCTG 73209 Query 475836 CTATTTTATCAGGTCAA--TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAAC 475893 |||| || ||| || ||| | | | | | || | |||| ||||| || || Sbjct 73208 CTATATTGAGCGGTGAACGTCATTCAAAGA--TTCAGGATGTCTTACTCGTTGATGTCAC 73151 Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953 |||| | || ||||| ||||||| | || || | ||||| || || |||| | || Sbjct 73150 TCCATTGTCTCTAGGTATTGAAACTGCCGGTGGAGTCATGACAAACATTGTTGAACGTAA 73091 Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013 | ||||| ||||| | ||| || || | ||||| |||||||||||| || | Sbjct 73090 CGCGAAGATCCCTTGCAAGCATTCACAAAGGTTCACGACTTACTCTGATAATCAACCAGC 73031 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073 || || || ||| ||| ||||| |||||| | ||||| ||||| || | | || Sbjct 73030 AGTTACAATTCAAGTCTACGAAGGAGAAAGAGCTATGACTAAGGATAACAATTTATTAGG 72971 Query 476074 AACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||| || |||| |||||||||| ||||| | || || || || ||||| || Sbjct 72970 AACATTTGAT-TTGACAGGTATTCCTTTAGCTCCACGTGGTGTGCCACAGATTGACGTGT 72912 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||||| | || || || ||||||||||| || ||||| Sbjct 72911 CTTTTGATTTGGACGCTAACGGTATTCTTAACGTATCTGCT 72871 Score = 86.0 bits (94), Expect = 4e-11 Identities = 161/234 (69%), Gaps = 11/234 (5%) Strand=Plus/Plus Query 290726 CCGTCATTAATATTCATTAATGAAATATCTAATGTTCCTGCACCAAAATCGTATATAATA 290785 || |||| |||| | | | |||| ||| ||||| || |||||| ||| | || | | Sbjct 73699 CCTTCATCAATAGTTAAAATAGAAACATCAAATGTGCCGCCACCAAGGTCGAAAATTAAA 73758 Query 290786 ACATTAC-CTCCATTTTTATTTGTCCAAGTTTTGCTTCCAAGACCATATGTTAATGAAGC 290844 ||||| | ||| | ||| || ||||| || ||| ||||| | | | || Sbjct 73759 ACATTTCTCTCGCCTCTTA-------AATTTTTG--TCTAAG-CCATAAGCCAGAGCCGC 73808 Query 290845 TGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAA 290904 ||| || |||||||||||||| | | |||| |||||| ||||| | | ||| Sbjct 73809 TGCAGTAGGTTCATTTATAATACGGAGAACATTAAGACCAGCAATAGAACCAGCGTCTTT 73868 Query 290905 AGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTT 290958 ||| ||||| | |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 73869 AGTAGCCTGTCTCTGCGAATCGTTGAAATAAGCAGGCACTGTAATCACAGCCTT 73922 >seq538 Length=46986 Score = 210 bits (232), Expect = 1e-48 Identities = 689/1056 (65%), Gaps = 35/1056 (3%) Strand=Plus/Plus Query 592129 TCCAAAATATATAGTTTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAA 592188 |||| | ||||||||||||||||||| |||||| || ||| ||| | Sbjct 42087 TCCATAGTATATAGTTTCAAATATTTGTTGATTAAGTAAAATTGCTTCTTCACTCTCATA 42146 Query 592189 TGGAATTTTAAATATAGCAAACACATCGGCTAATCCTTGTACACCAACGCCAATAGGTCT 592248 |||| | | | || |||| |||| |||||||| || ||||| | ||||||||| || Sbjct 42147 GGGAAATCTCATTAACACAAATGCATCTGCTAATCCCTGAACACCGATGCCAATAGGCCT 42206 Query 592249 ATGGCGTAAATTTGAAACACGTGTTTTTTCTACTGGATAATAATTTACATCAATAATATT 592308 ||| | ||| ||| || || | |||||||| | || ||||||||||| || Sbjct 42207 ATGTTTCATATTCGAATTCTTTGCTTCTGGCACTGGATAGAAGTTAACATCAATAATCTT 42266 Query 592309 ATTTAAATTTCTTGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACTCTGG 592368 |||||||||| ||||| | || | | |||| | ||||| | | ||| ||| | Sbjct 42267 ATTTAAATTTTGTGTAACAGTTTTAGTAACCTGTTTTAATTTTTGAAAATTAAAAGTTTT 42326 Query 592369 AACACCGTTTTCATGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAACTGC 592428 | |||||| || ||| ||| | | || || | ||||| || ||||| Sbjct 42327 A------TTTTCAACAAACATA---TTA---ACAGCTATGGACGCTAAATTGCACACTGC 42374 Query 592429 ATATTCATCTGCAGATGAGAATTCTACAATTTCACAACAAAGATTTGAGCCATTAATTAC 592488 |||||| | |||| | || |||||||| ||||| || || || || Sbjct 42375 CACTTCATCAGGTGATGTATACTCAACAATTTCTGTGCAAAGGTTGCTGCATTTTATAGT 42434 Query 592489 GCCTATATTAATCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATGTATGGTAC 592548 ||| | ||| | ||||| |||| ||| || ||||||| |||| || |||||| Sbjct 42435 GCCAAGATTTTTTTGATTACTTTTTCTGTTGCAAGAATCTTTATACAACATATATGGTGT 42494 Query 592549 ACCTGTTTCAATTTGTGTTTCCATTATTTTAAACCATAAATCTCTTGCTTTGATTTGTTT 592608 |||||||||| ||||| ||| |||||| ||| ||| | ||| | |||||| Sbjct 42495 TCCTGTTTCAACTTGTGCTTCTATTATTGCTTTCCACAAAACCTGTGCACGAACTTGTTT 42554 Query 592609 TATAAATCTACCCTCATTTTCATA--TTTAAGATAA-GCTTTATTAAATTCTTCACCATA 592665 || | | | || | |||||| ||| | |||| |||| | ||||||||||| | Sbjct 42555 TACATAGCGTTTTTCTTGTTCATACTTTTCATATAAAGCTTCA---AATTCTTCACCCCA 42611 Query 592666 TTT-TCCTACAATATCTGGACA-TTGTGATGGACACATAAGTGACCAATTTTCATCTTTT 592723 || |||| | || || |||||| ||||||||||| ||||||||||| |||| Sbjct 42612 ACAATCAGCCAATC-CAGGGCAGTTGTGA-GGACACATAAGACTCCAATTTTCATTTTTT 42669 Query 592724 TCAACACGATCCATGAAAATATTATTAATCATTAATCCAAGGAATAAATCTCTGGCTCTT 592783 || || || | ||| || | || ||| ||| || |||||| ||||| |||| | Sbjct 42670 TCTACCCGTTTCATAAACAAATCTGGTATCCATAAAGCATAGAATAATTCTCTTGCTCGT 42729 Query 592784 TCCGTTTCAGCACCAGTATTTTTCTTTAGATCAAGGAAGAAAAATATATCACCATGCCAA 592843 | ||| ||||||||| || |||| ||| | || ||| | ||| | |||||| Sbjct 42730 ACTTCTTCTTTACCAGTATTCTTTTTTAAATCTAAAAATTCAAAGACATCTGCGTGCCAA 42789 Query 592844 GGTTCAATAAATACCGCAAATGAACCAG---CTCTTTTACCACCTTGATTCGCATATCTG 592900 ||||| | | | || ||||||| |||| | | ||||| ||||||| | |||||||| Sbjct 42790 GGTTCCAAATACACTGCAAATGCTCCAGGGCGTTTGTTACCCCCTTGATCCACATATCTG 42849 Query 592901 GCTATGTCATTATATATTGATA--ATACTCTCAA-TCCGTTAGATGTACCTTGAGTAGAA 592957 || ||| |||||| | | || ||| ||| || || || | || | ||| | Sbjct 42850 GCAGTGTTATTATAGACTCTTAACATAGGAACAAGACCATTGGAAATCCCATTTGTACCA 42909 Query 592958 CTAATATAAGCTCCTTCAACCCGAACATTAGACATATTAATACCTATACCTCCCGCAAAT 593017 |||||||| ||||| | | | | | || || || ||| |||||||| || | Sbjct 42910 GCAATATAAGTTCCTTTAGCTCTTATGCAATGCACATGAACACCGATACCTCCAGCTGAC 42969 Query 593018 TTACTAATAACAGCACAATCTTTCCAAGATTCACCTAATGATGTCATA---TCATCTTTT 593074 || ||| | ||||| | ||| | ||| || | | ||| |||||||| Sbjct 42970 TTGGAAATTAATGCACATTGTTTTAGTGTATCATATATTCCTTCGATACTGTCATCTTTC 43029 Query 593075 ACACCCATTAAAAAACAACTTGATAATT--GTTCATAAGGAGTACCCGCATTAAATAAAG 593132 | | | | | |||||| || |||| | || | ||||| | ||| ||| | | Sbjct 43030 ATAGCTACAAGGAAACAAGAAGACAATTGAGGTCTT--GGAGTCGCAGCAGAAAACATTG 43087 Query 593133 TTGGAGTTGCATGAGTAAAATATCCTTCTGATAACA 593168 |||| ||||||||||||||||| ||| ||||||| Sbjct 43088 TTGGGCTTGCATGAGTAAAATATTTTTCAGATAACA 43123 >seq5066 Length=19128 Score = 156 bits (172), Expect = 3e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || ||||| | ||| |||||| || |||||||| | || || Sbjct 18844 ACGAAGCCGGAGAACCAGATGTAAGGTAGATTCTTTTTGAATGTTATAATCGGATAAGGT 18785 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||||||||| ||||||||||||||||| | |||||| ||||| || ||||| || Sbjct 18784 TCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGGGGAATGCC 18725 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| |||||||||||||| ||| || ||| || ||||| | || | ||| | Sbjct 18724 TTCTTTGTCTTGAATCTTCGCTTTAACGTTTTCGATGGTATCGGATGGTTCAACTTCTAA 18665 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| ||||||||||| |||||||| || Sbjct 18664 AGTAATAGTCTTACCCGTGAGAGTCTTCACGAAAATCTG 18626 Score = 156 bits (172), Expect = 3e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| ||||| | ||||||||| || || || |||||| || | ||| || Sbjct 19072 ACGGAGACGAAGTACCAAGTGAAGTGTAGACTCCTTTTGAATATTATAGTCTGATAGTGT 19013 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||||| |||||||| || | ||| |||||||| || ||||| || Sbjct 19012 ACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGTTGATCTGGGGGAATGCC 18953 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| ||||||||||||||| ||||||| || |||||||| | || | ||| || Sbjct 18952 TTCTTTGTCTTGAATCTTTGCTTTGACATTCTCGATAGTATCCGAAGGTTCAACTTCGAG 18893 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| || ||||| ||||||||||| || Sbjct 18892 CGTTATAGTTTTACCTGTAAGAGTTTTAACGAAAATCTG 18854 >seq3177 Length=92477 Score = 152 bits (168), Expect = 3e-31 Identities = 389/586 (66%), Gaps = 7/586 (1%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| ||||| |||||| | ||||| || ||| ||||| | |||||||||| |||| || Sbjct 62954 TGCTATTGGAATTGATCTTGGAACAACATACTCCTGTGTCGGTGTTTGGCAACATGGAAA 63013 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| || || || |||||||| || || || ||||||||||| ||| |||| || Sbjct 63014 CGTGGAAATTATCGCAAACGACCAAGGCAACAGGACGACACCATCATACGTTGCTTTCAC 63073 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | |||||| || |||||||| || | || | || | || || || Sbjct 63074 GGACACAGAGCGTCTTATCGGCGATGCTGCGAAGAACCAGGTCGCGTTGAACCCCAACAA 63133 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||| ||||| ||||| |||| || || || || ||||| | | | ||| Sbjct 63134 CACAGTTTTCGATGCGAAAAGGCTGATCGGACGCAAATTCGATGACCCGAAAATTCAACA 63193 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAA 474625 || ||| ||||||||||| || || | | | | || ||||| | || || Sbjct 63194 GGACATGAAGCATTGGCCTTTCAAAGTCGTCAGCGACTGCGGCAAACCGAAGATCCAGGT 63253 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | || |||||||| || || | || ||| |||| ||||| || Sbjct 63254 CGAGTTCA--AAGGTGAAATGAAGAGGTTCGCGCCAGAAGAAATAAGCAGTATGGTATTG 63311 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 | || ||||| | || ||| | ||||| || |||| || || || || Sbjct 63312 ACGAAGATGAAGGAGACAGCGGAGGCCTATCTCGGTACGTCAGTACGGGACGCCGTTATC 63371 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || || || || || | || || || || ||||| ||| || Sbjct 63372 ACAGTGCCCGCTTACTTCAACGACTCACAGAGACAGGCCACGAAGGATGCTGGAGCTATC 63431 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | || || | || || || || ||||| || ||||| ||||| || || ||| Sbjct 63432 GCTGGTTTGAACGTCCTTCGAATCATCAACGAACC-ACTGCAGCTGCACTAGCGTACGGT 63490 Query 474866 CTTGATAAGAATTCTGACA-AAGAAGTAAATGTTTTAATCTTTGAT 474910 || || ||||| | ||| | || ||||||||| ||||| ||| Sbjct 63491 CTGGACAAGAACT-TGAAAGGCGAGCGAAATGTTTTGATCTTCGAT 63535 >seq4408 Length=116492 Score = 150 bits (166), Expect = 1e-30 Identities = 251/358 (70%), Gaps = 26/358 (7%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 || || |||||||||||||||||||| |||||||| |||| ||||| ||| ||||| ||| Sbjct 93134 GTATTTGATTGTTGGTTTGAATCAGGATCTATGCCCTATGCTCAAAGTCACTATCCATTT 93193 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATAT-TGCAGATTTTATAACAGAATC 297440 |||||| ||| ||| || | ||||| | ||| |||| | | || Sbjct 93194 GAAAATAA--AAA----AGAGT-TTGATGAGATTTTTCCTGCTAATTTCGTTGCTGAGGG 93246 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 || |||||||||||||| ||||||||||| | | || || ||||||||| | ||||| Sbjct 93247 CATAGATCAAACAAGAGGGTGGTTTTATACACTGATTGTGCTATCTACAGCTTTGTTTAA 93306 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 ||||| |||| |||||| |||| | || ||| | | ||| ||||||| ||||| Sbjct 93307 TAAACCCCCATTCAAAAATTTAATAGCTAATGGATTGATCTTGGCATCTGATGGTCAAAA 93366 Query 297561 AATGTC----AAAAAGTAAAGGTAATTATCCTGATCCAAATATTTTGATGGA-----TAA 297611 |||||| |||||| || || ||||| |||||| || || | | ||| Sbjct 93367 AATGTCTAAGAAAAAGAAA----AACTATCCAGATCCA-----TTAGAAGTAGTAACTAA 93417 Query 297612 ATATGGTGCAGATACTTTACGTCTTTATTTATTATCAACACCTGTAGTTAAAGCCGAA 297669 |||||| || ||| | ||| | || ||| | || | || || |||||||||||| Sbjct 93418 ATATGGAGCTGATGCATTAAGACTCTATCTTGTAAATTCTCCAGTTGTTAAAGCCGAA 93475 Score = 100 bits (110), Expect = 2e-15 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 296125 TTTATGGAATCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAA 296184 ||||||||||||||| ||| |||| ||| ||||||| | || | |||| | | | Sbjct 92034 TTTATGGAATCTGTTTGGTGGGCATTCAAAGAACTTTACAATAAAGGCCTGATATATCAG 92093 Query 296185 GGTTATAAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCA 296244 ||| ||||| ||||| ||||| |||| |||| |||||| | ||| ||||||| || Sbjct 92094 GGTGTAAAAGTAATGCCATATTCAACTGCTTGCTCAACACCACTCTCTAATTTTGAAGCT 92153 Query 296245 AAACAAAATTATAAAGAGATTATTGATCCA 296274 |||||| |||||||| || |||||||| Sbjct 92154 GGACAAAACTATAAAGATGTTGTTGATCCA 92183 >seq1756 Length=220567 Score = 145 bits (160), Expect = 5e-29 Identities = 252/361 (70%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||||||| || | |||||||| || || || ||| |||| || || |||||||| Sbjct 59137 GATGCTAAACGACTTATTGGTCGCAAATTCGAAGATGCCACCGTACAGGCTGATATGAAG 59078 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCA 474637 || ||||| ||| | ||| | | || ||| ||||||||| | || | | | | | | Sbjct 59077 CACTGGCCATTTGAAGTGGTCAGTGATGGAGGTAAACCAAAGATTAAGGTATCATATAAA 59018 Query 474638 GGTGAA-ACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAA 474696 || ||| || | ||| | ||| ||| | || | |||||||||| | | || ||||| Sbjct 59017 GGCGAAGACAAGACATTCTTCCCCG-AGGAAGTCAGTTCAATGGTTCTCACAAAGATGAA 58959 Query 474697 ACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 |||| || ||| | || || || || || ||||||||||||| ||||||| Sbjct 58958 GGAAACAGCCGAGG-CTTACCTCGGCAAAACGGTGCAAAATGCAGTAATTACGGTTCCAG 58900 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 | || |||||||| || || || || || || ||||||||||| | || | || | | Sbjct 58899 CGTACTTTAATGACTCACAGCGACAGGCCACAAAAGATGCGGGTACCATCTCTGGCTTGA 58840 Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | ||| | || || || |||||||| || || || || |||| || |||||||| || | Sbjct 58839 ACGTTCTCCGAATCATCAATGAACCGACTGCTGCTGCGATTGCGTACGGTCTTGACAAAA 58780 Query 474876 A 474876 | Sbjct 58779 A 58779 Score = 102 bits (112), Expect = 5e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||| | || || || ||| ||||| | ||| | ||| | |||||||| ||| Sbjct 60398 GGTATTGATCTGGGTACCACATACTCGTGTGTGGGTGTCTTCCAACACGGTAAAGTGGAA 60339 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || || ||||||||||| || || || || || || ||||||||| | || || || || Sbjct 60338 ATTATCGCCAATGACCAGGGCAACAGGACTACGCCCTCATATGTTGCGTTCACAGACACC 60279 Query 474455 GAACATCTTATTGGAGATGCTGCTAA 474480 |||| ||| || || ||||| ||||| Sbjct 60278 GAACGTCTCATCGGCGATGCCGCTAA 60253 >seq1655 Length=413290 Score = 143 bits (158), Expect = 2e-28 Identities = 253/367 (69%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565 ||||| | || || || ||| | || || ||| | || ||||||||| | | | ||| Sbjct 54748 AATACAGTATTCGACGCAAAACGTTTAATCGGTAGAAAATTTGATGATCCTAAAATTCAA 54807 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 || || || ||||| ||| | || || | | ||||||||| | || | | Sbjct 54808 CAAGACATTAAACACTGGCCATTTGAAGTCATTTCGGATAATGGTAAACCTAAAATTGTA 54867 Query 474626 GC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 | |||||| |||||||| || ||| | || ||| |||||||||| |||||| Sbjct 54868 GTTGAATACAA--AGGTGAAAAGCGACGCTTTACTCCCGAAGAAATTTCTTCTATGGTTC 54925 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 || | ||||||||| || ||| | | || ||| |||| ||||| || | Sbjct 54926 TAACTAAAATGAAAGAAGTCGCCGAAACCTTCCTCGGAGGTATTGTAAAAGATGCTGTTA 54985 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | ||||| ||||||||||| |||||| ||||||| |||||||| ||||| || || | Sbjct 54986 TAACTGTACCAGCATATTTCAATGATGCTCAACGACAAGCAACAAAAGACGCTGGTGCTA 55045 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| | | | ||||| || | || || ||||||||||| || |||||||| ||||| | Sbjct 55046 TTGCTGCTTTAAATGTGCTAAGAATCATCAATGAACCAACCGCTGCCGCACTCGCTTACG 55105 Query 474864 GTCTTGA 474870 | || || Sbjct 55106 GACTGGA 55112 Score = 96.9 bits (106), Expect = 2e-14 Identities = 184/267 (69%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 475763 TTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCT 475822 |||||||| ||| |||||| | |||||||||| ||||| ||||||||||| ||| Sbjct 55687 TTTAATGGAAAAGTTTTAAATCTTTCTATAAATCCTGACGAAGCAGTTGCATATGGTGCT 55746 Query 475823 GCTGTCCAAGCAGCTATTTTATCAGGT--CAATCAGACGAGAAACTAAATAATATTGTAC 475880 || || |||||||| |||||| | ||| || | || | | | || | || ||| Sbjct 55747 GCCGTGCAAGCAGCCATTTTAACCGGTTCTAAAGACACTCGCATCCAA--GACGTTCTAC 55804 Query 475881 TTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATC 475940 |||| || || | |||| | || | || | ||||||| |||||| || ||||| || Sbjct 55805 TTGTCGATGTTATTCCATTATCGCTCGGAATAGAAACAGCTGGAGGCATCATGACAAAAT 55864 Query 475941 TTATTGACAGAAATACTCCTATCCC--ATGCAAAAAATCAAAAGTATTTTCCACTTATTC 475998 | | || ||||| || || || ||| |||| ||| | ||| | |||||| | Sbjct 55865 TGGTAGAAAGAAACACGAGAATACCGATTGCGCAAAA--GAAAATTTTTACAACTTATGC 55922 Query 475999 TGATAATCAAACAACTGTAACCATCCA 476025 ||||||||| | |||| || || || Sbjct 55923 CGATAATCAACCTGCTGTCACGATTCA 55949 >seq733 Length=158335 Score = 122 bits (134), Expect = 6e-22 Identities = 361/552 (65%), Gaps = 6/552 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| |||||||| ||||| || || ||||| | || |||||| |||| || Sbjct 49561 GCAATTGGAATTGATTTGGGAACGACGTATTCATGTGTGGGAGTCTGGCAACATGGAAAC 49502 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || || ||||||||||| || ||||| || || |||||||| | || || Sbjct 49501 GTGGAGATCATCGCAAATGACCAAGGAAACAGAACTACTCCGTCATATGTCGCGTTCACG 49442 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTAA 474507 || || |||| || || || || || || || | || | || ||| || ||| || Sbjct 49441 GACACCGAACGACTCATCGGCGACGCGGCGAAGAACCAGGTCGC-TCTAAACCCTAACAA 49383 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | || || || || | |||| || || || || || ||| | | | || Sbjct 49382 CACAGTGTTCGACGCGAAGCGCCTGATCGGCCGCAAGTTCGACGATCCGAAGATTCAGCA 49323 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA-- 474625 || |||| || ||||| || || || | || | | | || || || | ||| || Sbjct 49322 GGACATGCAGCACTGGCCCTTCAAAGTTGTCAACGATTGCGGCAAGCCGAAGATACAAGT 49263 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | | || ||| |||||||| | || ||||||| | || ||||| | Sbjct 49262 GGAGTTCA--AAGGAGAAACTAAGCGGTTCGCACCGGAGGAGATAAGCAGCATGGTACTG 49205 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 | || ||||| | || || |||| || || | || || || ||||| Sbjct 49204 GTGAAGATGAAGGAGACGGCCGAAGCATACCTCGGTACGGCCGTCCGCGACGCCGTAATC 49145 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || || || ||||| || || ||||| ||||| ||||| || Sbjct 49144 ACAGTCCCGGCGTACTTCAACGACTCTCAGCGCCAGGCAACGAAAGACGCGGGTGCGATA 49085 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || || || || || || || || || || || || ||||| || || || ||| Sbjct 49084 GCCGGCCTGAACGTCTTGCGGATAATCAACGAGCCCACTGCCGCCGCTCTAGCGTACGGT 49025 Query 474866 CTTGATAAGAAT 474877 || || |||||| Sbjct 49024 CTCGACAAGAAT 49013 >seq944 Length=227114 Score = 113 bits (124), Expect = 3e-19 Identities = 259/389 (67%), Gaps = 6/389 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || ||||||||||| ||||| ||||| ||||| || ||||| | | | | || || Sbjct 26566 AACCCTGATGAAGCCGTTGCCTATGGTGCTGCCGTTCAAGCTGGTGTCCTCAGTGGAGAA 26625 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 |||| ||| | | ||||| || | ||||| | || ||| | | ||| | Sbjct 26626 CAAGAC-----ACTGA-TGCGATTGTGCTCCTCGACGTCAACCCTCTTACCATGGGTATC 26679 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || |||||||| | |||||||| || || | || ||| ||||| ||| Sbjct 26680 GAGACTGTTGGAGGTGTGATGACTAAACTGATCCCTCGTAACACTGTCATCCCCACAAAA 26739 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 ||||| | |||| || || ||| || ||| || ||||| || ||| | | | Sbjct 26740 AAATCTCAGATATTCTCTACCGCCAGTGACAACCAACACACCGTAACTATTCAAGTTTAT 26799 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || |||||| | | |||||||| ||| | ||| |||| ||| |||| ||| Sbjct 26800 GAGGGTGAACGTCCCATGACTAAAGACAATCATTTACTCGGAAAGTTTGATCTCACTGGT 26859 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 ||||| ||||| || ||||| | || ||||||||||| || || || || || || ||| Sbjct 26860 ATTCCACCTGCACCAAGAGGTATCCCACAAATTGAAGTAACATTCGAGATCGACGCCAAT 26919 Query 476153 GGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| ||| | || ||||| ||||| Sbjct 26920 GGTATCCTTCAAGTATCTGCTGAAGATAA 26948 >seq1898 Length=134552 Score = 96.9 bits (106), Expect = 2e-14 Identities = 125/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 817092 TTTTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGAT 817151 || || | ||||| ||||| ||||| |||||||| ||||||||| |||| || || || | Sbjct 118240 TTATAGTGGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTTGGCCATTTAAGGT 118181 Query 817152 CTACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATG-TGAAGTACAA 817210 | || || |||||||| ||||| | | | ||||||| | || ||| || | Sbjct 118180 CAACTATTATTGGTGACAGCATTTGTCGTGTTTTAGAATTTT-TAAATCATGATGTGCTC 118122 Query 817211 AGAATAAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 | | || ||| |||| |||||||| ||||||||||||||| | ||||| Sbjct 118121 CGCCTTAACCATCTTGGAGATTGGGGCACACAATTTGGTATGCTCATTGC 118072 >seq1859 Length=410201 Score = 96.9 bits (106), Expect = 2e-14 Identities = 239/360 (66%), Gaps = 7/360 (2%) Strand=Plus/Plus Query 269118 TAACAATTGTGTCGGTCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAA 269177 ||| | |||| |||||| | || || || ||| |||||||| | ||||| ||||| | Sbjct 339552 TAAAATTTGTACCGGTCCTCTTGCCCTTGAATGAATTTTATCGTCGACCATATGTTTGAG 339611 Query 269178 ACGCTGATAATATGTCGGACCAATAAATATTTTGACATGCATTTTTTCTCCCGTCATACC 269237 |||||||| || || || || | |||| || | | || || ||||| || Sbjct 339612 TCGCTGATAGTAAGTAGGGCCCAAGAATACTTGAGCGTTAATCTTGCGGCCCGTATGGCC 339671 Query 269238 ATTTGTCATTGTTTCATTTCCCCATGCTTCATATCCGTA----TGAAACTAGTTCATCAT 269293 || ||| ||||||||| | | | ||| ||||| |||| | || | Sbjct 339672 GTTATACATCACTTCATTTCCACGTAAATGATACCCGTACTCCTGAAGTAAAG--ATGAA 339729 Query 269294 TTATTTTATTAATATCTA-CACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATA 269352 | |||| | || | | || | |||| ||||| ||||||||| | ||||||| | Sbjct 339730 ATCTTTTGTACATTTACAGCATCATTAAACGGTGTGGCATCACCAATTTCTCCTTTGTTT 339789 Query 269353 GCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATA 269412 | ||||||||||| | |||||| ||||| || ||||| |||||||| ||| || Sbjct 339790 GAGGATACTTTTCCTTGAATACATTCGATCAAGTGGCCAATTGTCATACGAGATGGAATG 339849 Query 269413 CAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGCATATCTGCT 269472 || |||||| ||||||||||| || || || |||||| ||||||||| || Sbjct 339850 GCATGAGGATTGATAATAATATCAGGAGTAATACCCTCACAAGTAAAAGGCATATCTTCT 339909 >seq287 Length=420135 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 318639 ATTAATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTACAGT 318698 || || ||||| |||||||| || ||||||| | || || |||| ||| || || Sbjct 406521 ATCAAGACCATCTTCACCATATGCAAATTGAATGATGCTACTATCGGCATCTCTGACTGT 406580 Query 318699 ACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACC 318758 | |||||| | || | | |||||| ||| | ||| |||||||| ||| || Sbjct 406581 ATTATCATAAGCAACACTCAATCCTTCTAAATGTTTTATTAAACATCTTTGTAAATAGCC 406640 Query 318759 TGT--GTCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGG 318816 || | || |||||| | ||| |||| ||||| ||||||||| || |||||| ||| Sbjct 406641 TGAACGACT--AGTTTTTACAGCTGTATCAATAAGACCTTCTCTACCAGCCATACAATGG 406698 Query 318817 AAAAAGAATTC 318827 ||||||||||| Sbjct 406699 AAAAAGAATTC 406709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267824845627628