Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2364 87.8 2e-11 >seq2364 Length=50274 Score = 87.8 bits (96), Expect = 2e-11 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 733395 ACCGGCGAGCCCATGGCGGCGTTGATCTTCTCGGCGCCGGTCTACTACCAGGCCCTCCGG 733454 || |||||||| ||| ||||| | | ||||| ||||| ||||||||| || | Sbjct 333 ACGGGCGAGCCGCTGGAGGCGTACGTGTACTCGGGCCCGGTGTACTACCAGAAGCTAAAG 274 Query 733455 CACGTGGCCATCGACAAGATCCACGCGCGCCCGCGCGGTCCC-GTGCAGATGCTCACCAA 733513 ||| ||| |||||||| ||||||||| ||||||| ||| | |||| ||||||| Sbjct 273 CACATGGTGCAGGACAAGATGCACGCGCGCGCGCGCGGGCCCCGCGCAG-TGCTCACGCG 215 Query 733514 GCAGCCGGTCGAGGGCCGCTCGCGCTCGGGCGGCTTCCGTCTCGG 733558 || || ||||||||||||||| |||||| | || ||||| Sbjct 214 CCAACCCACCGAGGGCCGCTCGCGGGACGGCGGCCTGCGCCTCGG 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106461263653737