Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2364 93.3 7e-13 >seq2364 Length=50274 Score = 93.3 bits (102), Expect = 7e-13 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 653960 ACGGGCGAGCCCATGGAGGCGTTGATCTTTTCGGCGCCGGTCTACTACCAGGCCCTGCGC 654019 ||||||||||| ||||||||| | | |||| ||||| ||||||||| || Sbjct 333 ACGGGCGAGCCGCTGGAGGCGTACGTGTACTCGGGCCCGGTGTACTACCAGAAGCTAAAG 274 Query 654020 CACGTGGCCATCGACAAGATCCACGCCCGGCCGCGC-GGCCCCGTGCAGATGCTCACCAA 654078 ||| ||| |||||||| ||||| || ||||| ||||||| |||| ||||||| Sbjct 273 CACATGGTGCAGGACAAGATGCACGCGCGCGCGCGCGGGCCCCGCGCAG-TGCTCACGCG 215 Query 654079 GCAGCCGGTCGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 || || ||||||||| ||||| |||||| | |||||||| || |||||| Sbjct 214 CCAACCCACCGAGGGCCGCTCGCGGGACGGCGGCCTGCGCCTCGGCGAAATGGAG 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915367639751579