Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq5066 102 1e-16 >seq5066 Length=19128 Score = 102 bits (112), Expect = 1e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || || || |||||| | || || |||| || Sbjct 18624 TGCAGATTTTCGTGAAGACTCTCACGGGTAAGACTATTACTTTAGAAGTTGAACCATCCG 18683 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || ||| || || ||| |||||||||||||| || ||||| | Sbjct 18684 ATACCATCGAAAACGTTAAAGCGAAGATTCAAGACAAAGAAGGCATTCCCCCAGATCAGC 18743 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || || || | || ||| | |||| ||| | |||||||| | Sbjct 18744 AACGTTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGAACCTTATCCGATTATAACA 18803 Query 146212 TACAAAAAGAATCGAC 146227 | ||||||||||| || Sbjct 18804 TTCAAAAAGAATCTAC 18819 Score = 93.3 bits (102), Expect = 7e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | ||||| ||||| || || | || || |||| | | Sbjct 18852 TGCAGATTTTCGTTAAAACTCTTACAGGTAAAACTATAACGCTCGAAGTTGAACCTTCGG 18911 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||||| ||| || || ||| |||||||||||||| || ||||||| Sbjct 18912 ATACTATCGAGAATGTCAAAGCAAAGATTCAAGACAAAGAAGGCATTCCCCCAGATCAAC 18971 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| || || ||| | || || | | || || |||| ||||||| Sbjct 18972 AGCGTTTGATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTATCAGACTATAATA 19031 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| || || || | || || ||| Sbjct 19032 TTCAAAAGGAGTCTACACTTCACTTGGTA 19060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786085218492120