Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3412 493 1e-133 seq1756 224 7e-53 seq1655 210 2e-48 seq944 165 6e-35 seq2293 131 1e-24 seq1898 123 2e-22 seq538 98.7 7e-15 seq1498 89.7 4e-12 >seq3412 Length=86623 Score = 493 bits (546), Expect = 1e-133 Identities = 998/1466 (68%), Gaps = 20/1466 (1%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| || ||||||||||| || || ||||||||||| | || ||||| || || || Sbjct 72872 GCAGATACGTTAAGAATACCGTTAGCGTCCAAATCAAAAGACACGTCAATCTGTGGCACA 72931 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | |||| || || ||| ||||| ||||||||| | ||| ||||| ||| Sbjct 72932 CCACGTGGAGCTAAAGGAATACCTGTCAAATCAAATGTTCCTAATAAATTGTTATCCTTA 72991 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | || ||| || ||| | | ||| || |||||| | | ||||||||| || ||| Sbjct 72992 GTCATAGCTCTTTCTCCTTCGTAGACTTGAATTGTAACTGCTGGTTGATTATCAGAGTAA 73051 Query 281606 GTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || || || || || || | || ||||| || | | ||| | |||| ||| || || Sbjct 73052 GTCGTGAA-CCTTTGTGAATGCTTGCAAGGGATCTTCGCGTTACGTTCAACAATGTTTGT 73110 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | ||||| || ||||| | ||| ||||| | |||||||||||||| || | | Sbjct 73111 CATGACTCCACCGGCAGTTTCAATACCTAGAGACAATGGAGTGACATCAACGAGTAAGAC 73170 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 || |||| ||| || | || ||| | ||||| ||||| | || || ||||| Sbjct 73171 ATCCTGAATCTTTGAATGACGTTCACCGCTCAATATAGCAGCTTGTACTGCTGCTCCATA 73230 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG- 281843 ||| ||||||||||| ||||| | || ||| || ||||||||||| ||||| |||| Sbjct 73231 TGCGACAGCTTCATCGGGATTTATAGACAAATTAAGCTTTTTACCATTAAAAAACTTTGC 73290 Query 281844 -AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 | ||| ||| || ||||| ||||| | |||||||| ||||||||||| |||| Sbjct 73291 AATAGAGATTGAATT---TTAGGTATACGCGTCGATCCTCCGACTAATACAATGTCATTT 73347 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | ||||| ||||| | ||| |||| ||||||| || |||| || | Sbjct 73348 ATAGAACTCTTATCTAGTTTAGCATCGTTTAAAGCTTTTTCTACTGGTTGTAGTGTTATT 73407 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 | ||| | || || || ||||| ||| ||||||| | || | |||| Sbjct 73408 CGAAATAGATCAGAGTTTAGCTCTTCAAATCGTGCTCTAGATACCCTGGAAAAGAAATCT 73467 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 282082 || || || | |||| || | ||| || ||| || || |||||| || | ||| Sbjct 73468 ATCCCCTCATATAAAGCGTCTATTTCTATATTAGCTTCTGTACTAGAAGAAAGAGTACGC 73527 Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA--AT 282140 || || | ||| ||||||||||| | || | ||||| | ||| | || || Sbjct 73528 TTCGCTCTTTCGGCGGCTGTCCTTAGACGACGAAGAGCTTTGG--AATTAGTAGAAAGAT 73585 Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAAT 282200 | |||| | |||||| || || || ||| || | | |||||||| |||| || | Sbjct 73586 CCTTTTTGTGTTTTCTTTTAAATTCATCAGCAAGAAAATTAACAAGACGGCTATCGAAGT 73645 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTT 282257 |||| ||||| | | ||| | ||||| || || |||||| ||||| ||| || | Sbjct 73646 CTTCTCCTCCAAGGTGAGTGTCTCCTGCTGTTGCCTTTACTTCAAAAAGTGATCCTTCAT 73705 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| || |||| || ||||||| || || ||||| | || ||||| | ||||| Sbjct 73706 CAATAGTTAAAATAGAAACATCAAATGTGCCGCCACCAAGGTCGAAAATTAAAACATTTC 73765 Query 282318 TTTCTTTGTCTT-GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | || |||| ||||| || | ||||| || | ||| || ||||| |||||||| Sbjct 73766 TCTC-GCCTCTTAAATTTTTGTCTAAGCCATAAGCCAGAGCCGCTGCAGTAGGTTCATTT 73824 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 ||||| | | |||||||||||||||||| || || |||||||| || ||||| || Sbjct 73825 ATAATACGGAGAACATTAAGACCAGCAATAGAACCAGCGTCTTTAGTAGCCTGTCTCTGC 73884 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 |||||||| ||||| ||||| || ||||| || || | ||| |||| | ||| Sbjct 73885 GAATCGTTGAAATAAGCAGGCACTGTAATCACAGCCTTCATTATAGAGGTTCCTAGATAT 73944 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATG-AAATTTGTTCTGGAGAATA 282555 || || ||| |||||||||||| || | || || || || | ||| |||| | Sbjct 73945 GCTGCAGCAATTTCTTTCATTTTACTCAAGACCA-TGCTGCTTATCTCTTCCGGAGCGAA 74003 Query 282556 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 282615 | || | | || || ||| ||||| | | || || || | |||| || || Sbjct 74004 TCGCCTAGTTTTGCCTTTATACTTAACTTCGATTTTAGGCTTGCCACTATCATTTATCAC 74063 Query 282616 TTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAA 282674 |||||| ||||||| ||| | |||| |||| ||| || || | ||| | || || | Sbjct 74064 TTTAAAAGGCCAATGTTTAAGATCTTGCTGAA-TCTTAGGATCGTCAAACTTCCTTCCTA 74122 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 | | ||||| || ||||| || ||||| | ||||| | || | || | ||| || | Sbjct 74123 TGAGGCGTTTGGCGTCAAATATGGTATTACTAGGATTGAGAGCTACCTGGTTTTTAGCGG 74182 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 |||| ||||| || | || || || || || | |||||||| || || || | |||| Sbjct 74183 CATCACCAATGAGGCGCTCCGTGTCGGTGAACGCTACATATGAAGGCGTCGTTCTGTTAC 74242 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 282854 |||| ||||| |||||||| ||||| ||||||| ||||| || || ||||| | ||| Sbjct 74243 CTTGTTCATTGGCAATAATATCAACATTACCATGCTGCCACACTCCCACACACGAATAAG 74302 Query 282855 TTGTTCCTAAATCAATACCAATAGCA 282880 | || |||||||| || ||||| ||| Sbjct 74303 TCGTACCTAAATCTATTCCAATTGCA 74328 >seq1756 Length=220567 Score = 224 bits (248), Expect = 7e-53 Identities = 835/1295 (64%), Gaps = 18/1295 (1%) Strand=Plus/Plus Query 281405 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 281464 ||||| || ||||| || |||| | || || | ||||| || || || | ||| ||| Sbjct 57852 TTGTTGGTCGATTTTTCGACGGCTGATACGTTTAAGATACCGTTTGCGTCGATATCGAAT 57911 Query 281465 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 281524 || ||||| || ||||| || || | | || || || || ||| || | ||| | Sbjct 57912 GTAACTTCGATCTGAGGAACGCCACGAGGCGCTGGAGGAATACCTGTCAGTTCGAATTTA 57971 Query 281525 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAAC 281583 || || || || || || || | || ||||||||||| | |||||| |||| | Sbjct 57972 CCGAGGAGGTTGTTGTCCTTCGTCATCGCACGCTCACCCTCGAATACTTGGATGAGTA-C 58030 Query 281584 TACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGT 281643 | | ||| ||||| || || || || || | | || || || || || || Sbjct 58031 GCCGGGTTGGTTATCGGAGTATGTGGTGAAGGTTTGAGTTTGCTTGGTGGGGATGGTCGT 58090 Query 281644 GTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGG 281703 ||| | | || | ||||||| | ||| || || || || | ||| || || || || Sbjct 58091 GTTGCGCTTGATCAAGGTGGTCATGACACCGCCGGCGGTCTCAATACCGAGCGACAGCGG 58150 Query 281704 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 281763 |||||| |||| | | | | || | | || | | || | |||||| Sbjct 58151 AGTGACGTCAAGCAATAGCAAGTCCTGGACCTCCTCGGACTTGTCGCCGTGCAAAATAGC 58210 Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823 ||||| | |||||||| || || || || || ||||| || | | || || || | Sbjct 58211 AGCTTGTACTGCAGCACCGTAAGCGACGGCCTCGTCAGGGTTGATGGATTTGTTGAGCTC 58270 Query 281824 TTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTC 281882 || || ||||| || | | ||| || | ||| ||||| || ||||||| ||||| | Sbjct 58271 CTTGCCGTTGAAGAAGTCTTGAAGGAGCT-TCTGCACCTTGGGGATACGAGTGGATCCAC 58329 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 |||| | ||| || || || | | ||||| |||| ||| | || | | || | Sbjct 58330 CAACAAGTACGATGTCGTGGATGAGAGATTTGTCCATTTTGGCGTCTCTGAGAGACTTCT 58389 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | ||||| || | | || |||| || | ||||||||||| |||||||| Sbjct 58390 CGACGGGCTCCATGGTGGACCTGAACAGATCAGCGTTCAGTTCTTCGAAACGAGCTCTAG 58449 Query 282003 TAA--GAG-TGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTT 282058 ||| ||| || || || || || || ||||| | |||||| | |||||| | | Sbjct 58450 TAATCGAGGTG----TAGAAGTCGATACCCTCGAAGAGAGAATCGATTTCAATACTGGCC 58505 Query 282059 TGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG 282118 || |||||||| || || | | || || | || || || || || | || || | Sbjct 58506 TGGGTCGAAGACGAAAGAGTTCTCTTCGCCCTCTCGCAGGCAGTTCTCAACCTACGGAGC 58565 Query 282119 GC--TTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACC 282176 || | ||| || | | | | ||| | || || || |||||||| || | || | Sbjct 58566 GCCCTCTTGTTGGTGG--TAAGGTCTTTCTTGTACTTCCTCTTGAATTCCTGGACGAAGT 58623 Query 282177 ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTC 282236 | || | ||| || || || ||||| |||||||| | || | || | || | Sbjct 58624 GATTAACCATACGGTTGTCGAAGTCTTCGCCTCCCAAGTGCGTGTCACCGGCTGTGGACT 58683 Query 282237 TTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCA 282296 | |||| ||| | ||||| || | | || | | || || || ||||| || | Sbjct 58684 TGACTTCGAAGATACCATCCTCGATGGTCAGGATGGACACGTCGAAAGTACCACCGCCGA 58743 Query 282297 TATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAG 282356 ||| |||||||| || || |||| || ||||| |||||||| ||||||| | Sbjct 58744 GATCGAAAATAAGGACGTTACGTTCTCCACCTCCCTTTTTGTCAAGACCGTACGCAATCG 58803 Query 282357 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 282416 |||||||||| |||||||| || |||| | ||| || | |||| || | || |||| Sbjct 58804 CAGCAGCAGTCGGTTCATTGATGATTCGGAGAACGTTCAAGCCAGAGATGGTACCCGCAT 58863 Query 282417 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTG 282476 |||| ||||| |||| ||||| || ||||| || || ||||| ||||| || |||| | Sbjct 58864 CTTTTGTGGCCTGTCGCTGTGAGTCATTAAAGTACGCTGGAACCGTAATTACTGCATTTT 58923 Query 282477 TTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATG 282536 || ||| || | ||||| ||||||| ||||| || | | || |||||| Sbjct 58924 GCACCGTTTTGCCGAGGTAAGCCTCGGCTGTTTCCTTCATCTTTGTGAGAACCATTGAAC 58983 Query 282537 AAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGT 282595 | || || || ||| | || |||| ||| || ||||||||| | || | |||| Sbjct 58984 TGACTTCCTC-GGGGAAGAATGTCTTGTCTTCGCCTTTATATGATACCTTAATCTTTGGT 59042 Query 282596 TTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG 282655 ||| ||| || | | |||| ||||||||| | |||||||| | || || | Sbjct 59043 TTACCTCCATCACTGACCACTTCAAATGGCCAGTGCTTCATATCAGCCTGTACGGTGGCA 59102 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 || | || | | |||||| | |||||| ||||| Sbjct 59103 TCTTCGAATTTGCGACCAATAAGTCGTTTAGCATC 59137 >seq1655 Length=413290 Score = 210 bits (232), Expect = 2e-48 Identities = 511/760 (67%), Gaps = 23/760 (3%) Strand=Plus/Minus Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 282024 ||| || || ||||| | |||||||| ||||| || | | ||| ||||||| Sbjct 55488 AAATAAATCGGAACATAACTCTTCGAACCGTGCTCTTGTTATTTTTGCATAGAAATCAAT 55429 Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084 ||||| |||| ||| ||||| | ||| || || || |||| | ||||| Sbjct 55428 ACCTTCATGTAAAGCATCTACTTCTAAACTAGCTTCTGTACTCGATGATAACGTTCGTTT 55369 Query 282085 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTG 282143 ||| ||||||||||| || | | ||| | ||||| || | | | || || |||| Sbjct 55368 AGCTCGTTCACATGCGGTTCGCAATCTCCTCAAGGCCTTCGG-GTTACTTTTAATATCTT 55310 Query 282144 TTTTATATTTTCTCTTGAAAT-CTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 282200 |||| || ||| | ||||||| ||| | | ||| | || | |||||||| |||| Sbjct 55309 TTTTGTACTTTTT-TTGAAATTCTTGGCTAAA--ATGATCTACCATTCGATTATCGAAAT 55253 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 282260 | ||||||||||| | |||| |||| || | | |||| ||| | | ||||| Sbjct 55252 CCTCACCTCCCAAATGTGTATCACCTGCTGTTGACCGCACTTCGAACAAGGAACCTTCA- 55194 Query 282261 GAGA----CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 || | ||||| | ||||| || || ||||| | ||||| |||||||||||| Sbjct 55193 GATATTTGCAAAATTGACACATCGAATGTACCGCCACCGAGGTCAAATATAAGTACATTC 55134 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||||| | || | | || || || || || | || ||||| ||||||||||| Sbjct 55133 TTTTCTCCCTTCAAGTCTCTGTCCAGTCCGTAAGCGAGTGCGGCAGCGGTTGGTTCATTG 55074 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || ||||| | ||||| | | ||||||| || || ||||| || ||||||| ||| Sbjct 55073 ATGATTCTTAGCACATTTAAAGCAGCAATAGCACCAGCGTCTTTTGTTGCTTGTCGTTGA 55014 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 | ||| || |||||||| || ||||| ||||| |||||| |||| ||| | || Sbjct 55013 GCATCATTGAAATATGCTGGTACAGTTATAACAGCATCTTTTACAATACCTCCGA-GGAA 54955 Query 282497 GCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAAT 282554 | | || || || |||||||||| ||| || ||| || ||||||| ||| |||| | Sbjct 54954 G-GTTTCGGCGACTTCTTTCATTTTAGTTAGAACCATAGAAGAAATTTCTTCGGGAGTAA 54896 Query 282555 A---TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 282611 | | |||| |||| || ||| ||| ||| | |||||| | | | || Sbjct 54895 AGCGTCGCTT---TTCACCTTTGTATTCAACTACAATTTTAGGTTTACCATTATCCGAAA 54839 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 282671 | |||| ||||||||| | ||| || ||| ||||| | | |||| ||| | ||||| Sbjct 54838 TGACTTCAAATGGCCAGTGTTTAATGTCTTGTTGAATTTTAGGATCATCAAATTTTCTAC 54779 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 282711 | ||||| |||||||| || || | ||||| |||| || Sbjct 54778 CGATTAAACGTTTTGCGTCGAATACTGTATTTTTTGGGTT 54739 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 ||||| || || || || || ||||||||||| || ||| | || |||| |||| | ||| Sbjct 55106 CCGTAAGCGAGTGCGGCAGCGGTTGGTTCATTGATGATTCTTAGCACATTTAAAGCAGCA 55047 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || | ||| || |||||||||| || || ||||| ||||||||||||||||| Sbjct 55046 ATAGCACCAGCGTCTTTTGTTGCTTGTCGTTGAGCATCATTGAAATATGCTGGTACAGTT 54987 Query 86239 ATAACTGC 86246 ||||| || Sbjct 54986 ATAACAGC 54979 >seq944 Length=227114 Score = 165 bits (182), Expect = 6e-35 Identities = 437/659 (66%), Gaps = 15/659 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || || |||||||||||||| | ||| | || || || ||||| || | ||| Sbjct 26177 TCGAAGTCTTCACCTCCCAAGTGAGTGTCACCGTTGGTCGCGACTACTTCAAATACACCA 26118 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | |||| || | ||||| || || ||| |||||||||| ||| || | || || Sbjct 26117 TTGTCAATAGTAAGAAGAGACACGTCGAAGGTACCACCACCCAAATCGAATACGAGCACG 26058 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| |||| |||| |||| |||||||| || || | |||||| ||||| |||||| Sbjct 26057 TTCTTTTCACCTTCTT---TTTTGTCAAGACCGTAGGCGATAGCAGCGGCAGTAGGTTCA 26001 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 ||||| ||||||| ||||||||||| || || || ||||| || || ||||| | Sbjct 26000 TTAATGATTCTCATGACATTAAGACCGGCGATAACACCAGCATCCTT-GTAGCTTGACGC 25942 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||||| || || || || || || | ||||| | || || | || || | Sbjct 25941 TGAGCGTCGTTGAAGTAAGCGGGTACGGTGACGACGGCGTGGGTAACCTTCTTGCCGAGG 25882 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-- 282551 ||||| || |||| ||||| || ||| | ||| | ||||||| ||| |||| Sbjct 25881 TAAGCTTCAGCAGTTTCCTTCATCTTTGTTAGGACCATGGCGGAAATTTCTTCAGGAGCA 25822 Query 282552 AATATTGCTTGGATTCATTTTGATATGAT-ACTTCAAAATATGGTTTATTACCAACATTA 282610 || || || | | || || | | ||| || || ||||| | | | Sbjct 25821 AAGAT---TTTGTCGCCTTGTGCAGTCTTCACTGAAACATGAGGTTTGCTGTTCTTCTCA 25765 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 | |||||| ||||| | |||| | || ||||||| | |||| | | || | | Sbjct 25764 ACAACTTTGAATGGGAAGAATTTGACGTCATGTTGAACAGTGCTGTCACTCCATTCACGA 25705 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG-CAGCTTGATATTT 282729 || || | ||||| |||||||| | ||| || || || | || | || | || Sbjct 25704 CCGATAAGACGTTTGGCATCAAAGACAGTGTTTTCAGGGTTGGTGGTCAAC-TGGTTCTT 25646 Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCT---CTGTAAATGAAACATATGATGGAGTTGT 282786 ||| ||||| ||||| ||| |||| || |||| || | |||||||||||||| | Sbjct 25645 GGCAGCATCACCAATAAGACGTTCGCCCTCAGCTGTGAACGCCACATATGATGGAGTGAT 25586 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845 || ||||| || ||||| ||||| ||||| || ||||| | ||||||| |||| Sbjct 25585 ACGGTTACCCTGGTCATTAGCAATGATTTCCACACGTCCATTCTTGTATACACCAACAC 25527 Score = 125 bits (138), Expect = 5e-23 Identities = 326/490 (67%), Gaps = 18/490 (4%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| || | ||| ||||||||||| || | || ||||| ||||||||| Sbjct 26948 TTATCTTCAGCAGATACTTGAAGGATACCATTGGCGTCGATCTCGAATGTTACTTCAATT 26889 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || |||| ||||| | |||||||| || || | || ||| |||| || || | Sbjct 26888 TGTGGGATACCTCTTGGTGCAGGTGGAATACCAGTGAGATCAAACTTTCCGAGTAAATGA 26829 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT---TTGA 281593 || |||||||| | ||||||||||| ||| ||| ||||| ||| || ||| Sbjct 26828 TTGTCTTTAGTCATGGGACGTTCACCCTCATAAACTTGAATAGT---TACGGTGTGTTGG 26772 Query 281594 TTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATC 281652 || || || | |||| |||| |||||||| || || ||||| | | Sbjct 26771 TTGTCACTGGCGGTAGAGAATA-TCTGAGATTTTTTTGTGGGGATGACAGTGTTACGAGG 26713 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 || | || ||||| | ||| ||| | || || | ||| | | |||||| |||| || Sbjct 26712 GATCAGTTTAGTCATCACACCTCCAACAGTCTCGATACCCATGGTAAGAGGGTTGACGTC 26653 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 281772 | || ||||| | ||| || || ||| || | | | ||||||| Sbjct 26652 GAGGAGCACAATCGCAT-CAGT-----GTCTTGTTCTCCACTGAGGACACCAGCTTGAAC 26599 Query 281773 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 281832 ||||||||||| ||||| ||||||||||| || | | | | | | ||||||||| Sbjct 26598 GGCAGCACCATAGGCAACGGCTTCATCAGGGTTGATACCTCGGGATGGCTCTTTACCATT 26539 Query 281833 GAAAAAAT--TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAAT 281890 ||| || | ||| | || ||| |||||||||||||||| ||| || ||||| | Sbjct 26538 GAAGAACTCCTTG--ACCAGCTGTTGAACCTTAGGAATACGAGTTGAACCACCAACCAGC 26481 Query 281891 ACAATTTCAT 281900 ||||| |||| Sbjct 26480 ACAATCTCAT 26471 >seq2293 Length=188814 Score = 131 bits (144), Expect = 1e-24 Identities = 223/316 (71%), Gaps = 17/316 (5%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 |||||||||||| |||| |||||||| ||||||||||| || ||| ||||||| |||| | Sbjct 114881 TGTACCCTAATTCTGACCGAGGGAGACTCAGCTAAAACTTTAGCTGTGTCTGGACTTAGT 114940 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGA-GGAAAACTTTTGAATGTTAG 400415 ||| |||| ||||| ||||| ||||| || || |||| | || |||| ||| || || || Sbjct 114941 GTTGTTGGCAGAGACTATTACGGAGTATTTCC-CTTAAAGGGTAAACCTTTAAACGTCAG 114999 Query 400416 GGATGCTAGTCCTaaaaaaaTTGCC--GATAATGAGGAAATTACAGCAATCa-aaaaaaT 400472 ||||| ||| | ||| | || || |||| |||| || | | | | | |||| Sbjct 115000 AGATGC--GTCTCACAAACAGGTCCATGAAAATGTCGAAA-TAAATAACTTAGTACAAAT 115056 Query 400473 TGTTGGACTTGA--ACAAGGAAAAGTTTA-------TGATGATCTCAAAGGTTTACGATA 400523 | | || || | |||| | || | || ||| ||| | ||| || |||| Sbjct 115057 TTTAGGTCTACAATACAAAAAGAAATATAATTCAGTTGACGATTTGAAATCATTGAGATA 115116 Query 400524 TGGTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAAT 400583 |||| | ||||| | || ||||| ||| || || | |||||||||||| | || Sbjct 115117 CGGTAAAGTAATGATAATGGCCGATCAGGATCAAGACGGTTCGCATATCAAAGGACTTAT 115176 Query 400584 CATGAATTTTATCCAT 400599 ||| |||||||||||| Sbjct 115177 CATTAATTTTATCCAT 115192 >seq1898 Length=134552 Score = 123 bits (136), Expect = 2e-22 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 637121 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 637180 |||| || |||| || || ||||| ||||| |||||||||||| |||| |||||||| | Sbjct 118240 TTATAGTGGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTTGGCCATTTAAGGT 118181 Query 637181 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 637240 |||||||||||||||| |||||| | || |||||| | | || ||||| | Sbjct 118180 CAACTATTATTGGTGACAGCATTTGTCGTGTTTTAGAATTTTTAAATCATGATGTGCTCC 118121 Query 637241 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 | |||| ||| | || |||||||| || ||||| |||||| | |||||| || Sbjct 118120 GCCTTAACCATCTTGGAGATTGGGGCACACAATTTGGTATGCTCATTGCTCAT 118068 >seq538 Length=46986 Score = 98.7 bits (108), Expect = 7e-15 Identities = 625/986 (63%), Gaps = 52/986 (5%) Strand=Plus/Minus Query 163901 TGTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTCG 163960 |||||| || ||| |||| |||||| |||| ||||||||| || ||| | Sbjct 42348 TGTTAATATGTTTGTTGAAAATAAAACTTTTAATTTTCAAAAATTAAAACAGGTTACTAA 42289 Query 163961 TATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAAC 164020 | | | || | ||| | ||||| |||||||| |||| |||||||| | || | Sbjct 42288 AACTGTTACACAAAATTTAAATAAGATTATTGATGTTAACTTCTATCCAGTGCCAGAAGC 42229 Query 164021 TCGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTGGCTGATGT 164080 || | | ||| | || | |||||||| || || ||||||||||| || |||| Sbjct 42228 AAAGAATTCGAATATGAAACATAGGCCTATTGGCATCGGTGTTCAGGGATTAGCAGATGC 42169 Query 164081 ATTTGCCATGTTTAAGAC---TCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTAA 164137 ||||| |||| | || ||| | ||| ||| || | || |||| | Sbjct 42168 ATTTG---TGTTAATGAGATTTCCCTATGAGAGTGAAGAAGCAATTTTACTTAATCAACA 42112 Query 164138 AATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAA--ACTTGCTAGAGAA 164195 ||| || ||||| || || |||||||||||| ||| | | | | ||| |||||| Sbjct 42111 AATATTTGAAACTATATACTATGGAGCTTTA---GAAGCTAGTTGTGAATTGGCAGAGAA 42055 Query 164196 TTT-GGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGA 164254 ||| || | |||| | ||||||||| |||||| | || |||| ||| Sbjct 42054 GGAAGGTGTTTACTCTAGTTATGATGGAAGTCCTGCAAGTCAAGGCATTTTACAATATGA 41995 Query 164255 TCTTTGGAATTTCGATAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCA 164314 | ||| | | | || | | ||| | ||||||||||| ||| || | | Sbjct 41994 CATGTGGGAC----AAGACTC-CTACTGATC----TGTGGGATTGG--ACT---GCCTTA 41949 Query 164315 AGA----AATTTTAAATCATGGTGTTCGTAATAGTCTA--GTTACAACCTGTATGCCAAC 164368 | | |||| ||| |||||| |||||||| || |||| || |||||||| Sbjct 41948 AAAGAAAAATTGCAAAGCATGGTCTTCGTAATTCCCTTTTGTTAGCTCCA--ATGCCAAC 41891 Query 164369 TGCAAGTACTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATAT 164428 ||| || | || || | ||| ||||||| | ||||||| | ||| ||| || Sbjct 41890 TGCTTCCACAGCACAGATACTTGGAAATAATGAATCTTTTGAACCATTTACTTCAAACAT 41831 Query 164429 TTATTCAAGAAG--TACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAA 164486 ||| | | | || ||| |||| || | | || |||| | |||||| ||| | Sbjct 41830 TTACCAACGCCGGGTATTAT--CTGGTGAGTTTCAAGTTGTTAACCATCATCTCTTAACA 41773 Query 164487 GATCTTATTGA-GTTGGGTGTATGGAATTCAGAAATGGTTGATCTTATTAAATATTACAA 164545 ||| | | | | || | ||||| || ||| ||| || | || | | |||| Sbjct 41772 GATTTAACCCAAGCTGACT-TATGGGATGAAGATATGAAAAATTTGATAATTCACAACAA 41714 Query 164546 AGGATCTGTTGCTAATATTCCGAATATTCCAGACAACATTAAAGCTATTTACAGGACTGT 164605 |||||| | |||||| || |||||| | || || | | | |||| ||| || Sbjct 41713 TGGATCTATACAAAATATTGAAAAGATTCCAAAAAAAATAAGGGACTTATACAAGACAGT 41654 Query 164606 TTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCTGATAGAGCACCTTTTGTTGA 164665 |||||||||| | ||| | | || ||||||| || ||||||| | | ||| |||| Sbjct 41653 TTGGGAAATTTCAGTGAAAACAACTATACAAATGGCTGCAGATAGAGGAGCGTTTATTGA 41594 Query 164666 TCAAACACAGAGTATGAATTTGTACATTGATAAACCTAGTTTTGCAAGATTAAATTCTTG 164725 ||| | ||| | ||| | | | | | |||| | || || || ||||| ||| Sbjct 41593 TCAGAGTCAGTCATTTAATATTCATGTAGCTGAACCAAATTATGGAAAATTAACATCTAT 41534 Query 164726 TCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATGTATTATTTGAGATCTAAACC 164785 | || ||||| |||| || || | ||||| || ||||| ||||| | ||||||| Sbjct 41533 ACATTTCTATGCTTGGAAGATGGGATTGAAAACTGGAATGTACTATTTACGTACTAAACC 41474 Query 164786 AGCTTCTTCCGCCAATCAATTCGGAATTGACATCGATAAAATCAAAGAAATTGAATCCAA 164845 |||| || || | |||||| | || | ||||| | |||| || || | || Sbjct 41473 AGCTGCTAATGCTATTCAATT---TACTG---TTGATAAGACTAAAG---TTAAAGCTAA 41423 Query 164846 AAATGGT--ATTA-AAAAACAAGAAG 164868 ||||||| |||| ||||| |||||| Sbjct 41422 AAATGGTAAATTAGAAAAAGAAGAAG 41397 >seq1498 Length=44334 Score = 89.7 bits (98), Expect = 4e-12 Identities = 177/256 (69%), Gaps = 7/256 (3%) Strand=Plus/Plus Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 || |||| ||||||||||||||||||||| |||| | || |||| || | | || | Sbjct 24815 GTCACAATACGATTATCAAAATCTTCACCCCCCAGTCTAATATTACCAGTGGCTGCCTTC 24874 Query 282239 ACTTGGAAAAGTCCATCTT---CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCC 282295 |||||| | | ||||| ||| | ||||| | |||||| || ||||| || Sbjct 24875 ACTTGGTACACAGTATCTTGACCAATATTCAAAATGGACACATCAAATGTCCCACCTCCT 24934 Query 282296 ATATCAAAAATAAGTACATTCATTT-CTTTGTCTTGGTTTTTATCAAGACCATACGCAAA 282354 | |||| | | |||||| ||| ||| | || | | |||| | || ||||| || Sbjct 24935 AAATCATAGACAAGTACGTTCTTTTCCCCACTCAT-ATCCTTATTTAAGCCGTACGCTAA 24993 Query 282355 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT-TAAGACCAGCAATTCTTCCTG 282413 ||| || ||||| ||||||||||| || || | ||| | |||| ||||| || || | Sbjct 24994 AGCGGCGGCAGTCGGTTCATTAATTATCCTAATAACTTCTAAG-CCAGCGATCTGACCGG 25052 Query 282414 CATCTTTAGTGGCTTG 282429 || || |||||||| Sbjct 25053 CAAACTTTGTGGCTTG 25068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740224819810986