Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2293 86.0 7e-12 >seq2293 Length=188814 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| || || | | ||||| | || || |||||| ||||| |||||||| || Sbjct 116592 GTGAATATATATCTCGGACTTGCCGAGTCTTTTCCACCACAGAGACGAGTACCGAACTGA 116533 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || || |||||||| || || | ||||| | ||||||| |||| ||||||||||| ||| Sbjct 116532 CCTCTAGGCTCCAATAGATTAATATTGTTCGAGCCCACATAGTTCTGAGCCAAGTTTACA 116473 Query 117425 ATCGT 117429 || || Sbjct 116472 ATGGT 116468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547159493107800