Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2483 125 2e-23 seq64719 89.7 1e-12 seq52560 86.0 1e-11 >seq2483 Length=6067 Score = 125 bits (138), Expect = 2e-23 Identities = 203/291 (70%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 281735 CAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCC 281794 || ||||||||| ||||| | | ||| ||||| |||||||||| || || || Sbjct 3597 CATTTTCGTGAAAATATAACGCGGCGAAGCGGCATCTTTGCCACCCTGCAACCGCGTACC 3538 Query 281795 AAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAG 281854 ||||||||| |||| |||| | || ||||||||||| || || |||||||||||| Sbjct 3537 AAACTGACCGATAGGCAGCAACAAATTGATGTTATTGCTGCCAACAAAATCCTGAGCCAT 3478 Query 281855 GTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAAC 281914 ||| || |||||| || | ||| || || || || ||||| ||| | ||| || || Sbjct 3477 GTTAACAATTGTCATATGTAACGAAACTTCGCCATGATGATAAGCGGTCATTTCAGCCAC 3418 Query 281915 ATAACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGA---AAGCGCA 281971 |||||| || ||||| |||||||| ||| | | || ||| | | ||| | Sbjct 3417 TGAACCACCCAATTGTGCCACCTTCACATCTTTTTTATCATTTCGTCTAATACAAGTG-- 3360 Query 281972 ATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAAT 282022 || | | ||||||||| ||||| | ||||| || ||| ||||||| Sbjct 3359 -TACAGAATTTTTCGTTGGCCCGGCTTCAGGCCATCTACAACACACGGAAT 3310 >seq64719 Length=2502 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2132 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2073 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2072 CCCACGTTGGGC 2061 >seq52560 Length=3298 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||| |||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1685 GCCCGGCTAGCTTAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1744 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1745 CCCACGTTGGGC 1756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056537066858390