Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5310 93.3 5e-14 seq54457 89.7 6e-13 seq27572 89.7 6e-13 >seq5310 Length=1504 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||||| || || ||||| ||||| ||||| | ||||| ||| || |||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT--- 24311 || ||||| || |||||||| ||||| || | ||| || | || | | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 ||||| ||| ||||||||||| |||||||| ||||| || || || || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 24372 AAGAG 24376 || || Sbjct 676 AAAAG 680 >seq54457 Length=626 Score = 89.7 bits (98), Expect = 6e-13 Identities = 215/321 (67%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 53424 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 53483 ||||||| || || || || || ||||| | ||||| || |||| | || | || Sbjct 228 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATT 287 Query 53484 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 53543 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 288 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 347 Query 53544 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 53603 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 348 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 407 Query 53604 AATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTC-AGT 53662 |||| || ||||||||||| || ||| | | | | ||| | || || ||| | | Sbjct 408 AATTGCGGTCGATAATTTTATTCAGATTTTTCGCCACAAATTTAGCAACCTCTTTCAAAT 467 Query 53663 TTGAGAAAATCAAATTG---TC-CATCTA-TTACAAACATGTTCAATGCAATAGATGCCA 53717 || ||||| | ||| || | | | ||||||| | || | ||||| ||||| | Sbjct 468 GTGTGAAAACATATTTGCGCTCAGAACGATTTACAAATTTATTGACAGCAATTGATGCTA 527 Query 53718 GATTACAAACGGCTACCTCAT 53738 || |||||||| | ||||| Sbjct 528 AGTTGCAAACGGCGATCTCAT 548 >seq27572 Length=212 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 53424 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 53483 ||||||| || || || || || ||||| | ||||| || |||| || || | || Sbjct 1 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATT 60 Query 53484 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 53543 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 61 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 120 Query 53544 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 53603 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 121 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 180 Query 53604 AATTAATATCTATAATTTTATTGAGGTTT 53632 |||| || ||||||||||| || ||| Sbjct 181 AATTGCGGTCGATAATTTTATTCAGATTT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593016904411440