Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq10102 116 3e-21 seq18871 98.7 8e-16 seq47143 95.1 1e-14 >seq10102 Length=15563 Score = 116 bits (128), Expect = 3e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 25931 GGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCC 25990 ||| | |||||||||||||| || || | ||||||| || ||||||||||||||| ||| Sbjct 14494 GGTCTACACGGCTTTCACGTACATGAGTTTGGCGACCTGACCAACGGTTGCACGTCTGCC 14435 Query 25991 GGTGAGCACTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATGCTGAAATTAGGCAT 26050 || ||| || || ||| |||| ||||||||||| ||| || | | | ||| | ||| Sbjct 14434 GGACCGCATTTCAACCCCGAAAATGTGGACCACGGCGGTCCAGAAGATAACATTCGTCAT 14375 Query 26051 GTTGGCGACTTGGGCAA 26067 || |||||||||||||| Sbjct 14374 GTCGGCGACTTGGGCAA 14358 >seq18871 Length=4271 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 || |||||||||||| | ||||| || || || ||||| ||||| ||| || | Sbjct 3218 AAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTC 3159 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | || || | | | ||||| |||||| || |||||||| | || ||| Sbjct 3158 ATCTGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGA 3099 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||||||| || | || ||||| ||||||||| | ||||| | || | |||| || Sbjct 3098 TCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTA 3039 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||| || || |||||||||||||| || |||| ||||| ||||| || ||| Sbjct 3038 CAACATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGGG 2987 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | |||||||| || || ||||| || || ||| |||| || Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | |||| |||||| |||||||||||| | || ||||||| Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCAA 2640 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || || || || ||||| |||||||| | |||| | | ||||| ||| Sbjct 2639 CAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAAT 2580 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||| ||||| || || || | || |||| ||||||| || Sbjct 2579 ATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGG 2533 >seq47143 Length=13737 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| || | ||||| || || || ||||||||||| ||| || || Sbjct 1043 AAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCA 984 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || |||| |||||| ||||| |||||| | || |||| Sbjct 983 TCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGAT 924 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | | || || || || |||||||| |||||| | ||| || || || Sbjct 923 CAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTAT 864 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||| ||||| || | || | || ||||| ||||| || || Sbjct 863 AATATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGG 814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427840312581215