Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq10102 122 7e-23 seq18871 104 2e-17 seq47143 82.4 6e-11 >seq10102 Length=15563 Score = 122 bits (134), Expect = 7e-23 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 22140 GGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCC 22199 ||| | |||||||||||||| || || | ||||||| || ||||||||||||||| ||| Sbjct 14494 GGTCTACACGGCTTTCACGTACATGAGTTTGGCGACCTGACCAACGGTTGCACGTCTGCC 14435 Query 22200 GGTGAGCATTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATGCTGAAATTAGGCAT 22259 || |||||| || ||| |||| ||||||||||| ||| || | | | ||| | ||| Sbjct 14434 GGACCGCATTTCAACCCCGAAAATGTGGACCACGGCGGTCCAGAAGATAACATTCGTCAT 14375 Query 22260 GTTGGCGACTTGGGCAA 22276 || |||||||||||||| Sbjct 14374 GTCGGCGACTTGGGCAA 14358 >seq18871 Length=4271 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 || |||||||||||| | ||||| || || || ||||| ||||| ||| || | Sbjct 3218 AAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTC 3159 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | || || | | | | ||| |||||| || |||||||| | || ||| Sbjct 3158 ATCTGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGA 3099 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||||||| || | || ||||| ||||||||||| ||||| | || | |||| || Sbjct 3098 TCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTA 3039 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 ||| || ||||||||||||||||| || |||| ||||| ||||| || ||| Sbjct 3038 CAACATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGGG 2987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||||||| ||||| || || ||| || || || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| |||||| || || |||||| | || |||||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | | || ||||| || |||||| | || ||| | ||| | | ||||| ||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAAT 2073 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| ||| | ||| | || ||||| ||||| || || Sbjct 2072 ATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGG 2026 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | |||||||| || || ||||| || || ||| |||| || Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | || |||||| |||||||||||| | || ||||||| Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCAA 2640 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || || ||||| ||||||||| | |||| | | ||||| ||| Sbjct 2639 CAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAAT 2580 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || ||||| || || || | || |||| ||||||| || Sbjct 2579 ATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGG 2533 >seq47143 Length=13737 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 ||||||||||| || | ||||| || || || ||||||||||| ||| || || Sbjct 1043 AAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCA 984 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | || | || |||||| ||||| |||||| | || |||| Sbjct 983 TCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGAT 924 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| | | || || || || |||||| | |||||| | ||| || || || Sbjct 923 CAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTAT 864 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| || ||||| || | || | || ||||| ||||| || || Sbjct 863 AATATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGG 814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410321409639542