Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq18871 100 3e-16 seq10102 91.5 2e-13 seq47143 84.2 2e-11 >seq18871 Length=4271 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||||||||| || ||||| | || || ||||| || || | || ||||| | Sbjct 3218 AAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTC 3159 Query 40746 CACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | |||| | | ||||| | |||| |||||| | |||||||| || || || | | Sbjct 3158 ATCTGACACAATTGAAAACGTT-AAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAG 3100 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | || |||||| | || | || |||||||| | || |||| || || | ||||| Sbjct 3099 ATCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACT 3040 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||| ||||| | || |||||| | || || || || | ||||| Sbjct 3039 ACAACATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGG 2988 >seq10102 Length=15563 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 139372 CGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGC 139431 ||| || |||||||| ||||| || ||||| |||||| || |||||| |||||||| || Sbjct 14495 CGGTCTACACGGCTTTCACGTACATGAGTTTGGCGACCTGACCAACGGTTGCACGTCTGC 14436 Query 139432 CGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCA 139491 ||| ||| |||||||||| ||||||||||| || || | | || | || Sbjct 14435 CGGACCGCATTTCAACCCCGAAAATGTGGACCACGGCGGTCCAGAAGATAACATTCGTCA 14376 Query 139492 CGTCGGCGACCTGGGCAA 139509 ||||||||| ||||||| Sbjct 14375 TGTCGGCGACTTGGGCAA 14358 >seq47143 Length=13737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || ||||| | || || |||||||| || | || |||| |||| Sbjct 1043 AAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCG-AGCC 985 Query 40747 A-CCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | |||| | | || ||| | | || | ||||||| || || || || || || | | Sbjct 984 ATCCGATACGATTGAAAATG-TTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAG 926 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | || ||||| | || | ||| || ||||| || || || | | || | || |||| Sbjct 925 ATCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACT 866 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 | || || ||||| || ||||| ||||| |||| || || || | || |||| Sbjct 865 ATAATATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGGCG 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514607679891280