Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq18128 113 5e-20 seq67377 111 2e-19 seq18871 96.9 4e-15 >seq18128 Length=24892 Score = 113 bits (124), Expect = 5e-20 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 || |||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 9289 TACGAAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 9348 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||| ||||||||||||||||||| Sbjct 9349 ATACTGACCACTATACTACCGAGGA 9373 >seq67377 Length=7354 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 6975 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 6916 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 6915 TGACCACTATACTACCGAGGA 6895 >seq18871 Length=4271 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||| || || |||||||| || | ||||| |||||||||||||||| | || || Sbjct 2770 AAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGATAATGTGCGA 2828 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 |||| |||| ||| || ||||| || || | |||||||| || | || | | ||| Sbjct 2829 CCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCT 2888 Query 43086 TTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 |||||| ||| || ||| | | | | ||||| || ||||| || | || Sbjct 2889 TTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTT 2948 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || |||| ||| |||||||| || ||||| Sbjct 2949 ATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || | ||| || || || || ||||| ||| || ||||||||||| ||||||| Sbjct 2025 TCCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGA 2084 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 | || || | || || || || || ||||| || || | |||||||| || | ||| Sbjct 2085 TAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGG 2144 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||||||| | ||| |||| | ||||| | | | || || | || | Sbjct 2145 AATACCTTCCTTGT-CTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGA 2203 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||| || ||||| ||||| | |||||| || || |||||||| Sbjct 2204 CTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571138902542840