Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq47143 98.7 8e-16 seq18871 82.4 6e-11 >seq47143 Length=13737 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 ||||||| | || | ||| || || |||| |||| || |||||||| || ||||| | Sbjct 812 CGCCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCAT 871 Query 45168 TCA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGG 45225 ||| ||| | | || || |||||||||||||||||||| ||||| ||||| || || Sbjct 872 TCAACGTT--CTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGG 929 Query 45226 AGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTC 45285 ||| | ||| ||||| || |||||| ||||| | | | || ||| Sbjct 930 AGGAATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTC 989 Query 45286 CACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || | ||||| || || || || | ||| |||||||| |||||||| ||| Sbjct 990 GACTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTG 1044 >seq18871 Length=4271 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||||||||| ||||| || ||||| || |||||||||||| | || |||| Sbjct 3002 TAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTC 3061 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || | |||||| || || || || || || ||||| || || || | || || ||||| Sbjct 3062 TTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTC 3121 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | |||||| |||||| | | |||| ||| || |||| |||||||| Sbjct 3122 CTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGT 3181 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || | ||| |||||||| |||||||| Sbjct 3182 TTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394618003299013