Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5310 140 3e-28 >seq5310 Length=1504 Score = 140 bits (154), Expect = 3e-28 Identities = 336/503 (67%), Gaps = 4/503 (1%) Strand=Plus/Plus Query 13917 GATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTG-ATATATTTTCC 13975 |||||||| ||| | |||||||||||| || | || || ||| | || || | Sbjct 149 GATATTCAGAAACGCGTTTTTCAAAGAAATTCGAGACACGTT-TTGTGCAAATCAGTTGC 207 Query 13976 ATAAAATCAAATGGATTTGTTGACAT-AAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 ||||| | ||| ||||||| | ||| | ||| || | |||| ||||| | |||| Sbjct 208 ATAAATTTAAACGGATTTGAAG-CATGATACATTTGAGTACAATTTAGTTGCAGCAGTAG 266 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 || ||| |||| ||| |||||||| || |||| |||| |||||| || || | Sbjct 267 TCGATCGGCAACGAATTCAATATAAGTAGCCATTTTGTCACTCGACATACCGATCAGAGT 326 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 ||||||| || | ||||||||||| | ||||| || | || | Sbjct 327 GACAGGAAGCGCATCACACAGGAATTCTTTTTCGAGCTGGACAGCTTCACGAAAGATCTT 386 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 | |||||||||| | |||||| | || | ||| | | | | || |||||||| | Sbjct 387 CTTAATAATTTCTTCAGAAGGTTTCTGGTTCAAATGATGATAGAGTAGGCACGCAAACTG 446 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 |||||| || || || | |||||||| || ||| | || || ||||| || Sbjct 447 ACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAGCCAGGCATTAA 506 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 | ||||||||| | ||| ||||| || || || |||||| ||||| || || || || Sbjct 507 GCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAAATGCCTTCGAC 566 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14394 || ||||| || || | ||||| || || | ||| || | || || ||||||||| Sbjct 567 AGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAAATCCATTTTAA 626 Query 14395 AGCCCATTCAGAtttttttttAA 14417 ||||| || | ||| ||||||| Sbjct 627 GGCCCAATCGGCTTTCTTTTTAA 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481773097978040