Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq47143 96.9 3e-15 seq18871 93.3 3e-14 >seq47143 Length=13737 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || |||||||| ||||| || ||||| || ||| | | |||||| | |||||| || Sbjct 844 GTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTCTAGTTGTTTTCCG 903 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 || | || | | ||||||||| || | ||||||||||| ||||| | || || Sbjct 904 GCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTT-TCGCTTT 962 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 || | | ||| || || |||||| ||||| || ||| |||| || || || || Sbjct 963 AACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTTTTACCAGTTAAAGT 1022 Query 18308 TTTTACAAAAATTTGCATTTTTAAA 18332 ||| ||||||||||||||||| ||| Sbjct 1023 TTTCACAAAAATTTGCATTTTGAAA 1047 >seq18871 Length=4271 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175 ||||| || || || ||||| ||||| ||||||||||||| | || | ||||| Sbjct 3005 TACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTC 3064 Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235 ||||||||||| ||| | || | || ||||||||| || | ||||| || || Sbjct 3065 TAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTG 3124 Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | ||| || | | ||| |||||| | |||| ||| | || || |||| Sbjct 3125 GATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTT 3184 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || || || ||||| ||||| ||||||||| || Sbjct 3185 ACCAGTTAAAGTTTTCACAAATATTTGCATTCTT 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378905008067985