Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5310 111 1e-19 seq41171 109 5e-19 seq18871 104 2e-17 seq41170 96.9 3e-15 seq87437 86.0 6e-12 seq47143 84.2 2e-11 >seq5310 Length=1504 Score = 111 bits (122), Expect = 1e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 57957 GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGC 58016 || || |||| || |||| || || || || || |||||||| || ||||| || || Sbjct 602 GCAACATTCGGTGAACGGCTGATTGCTTTTGCGGCTGTCGAAGGCATTTTCTTCTCCGGA 543 Query 58017 AGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076 || ||||| || ||||| ||| | || ||||| || | ||||| ||| || | |||||| Sbjct 542 AGTTTTGCCGCTATATTCTGGCTCAAAAAACGACGCTTAATGCCTGGCTTGTCTTTTAGC 483 Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTA 58127 || || | |||||||| ||||| ||| |||| | | |||||||||||| Sbjct 482 AATGAACTTATATCGCGTGACGAAGGTTACCATTGTCAGTTTGCGTGCCTA 432 >seq41171 Length=1454 Score = 109 bits (120), Expect = 5e-19 Identities = 378/581 (65%), Gaps = 13/581 (2%) Strand=Plus/Minus Query 22146 TGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG-AC 22204 |||| | ||||||||| || || || ||||| | |||||| | || ||||| ||| || Sbjct 588 TGCGCAAATAATACATTCCTGTTTTTAGACCAAGCTTCCAACCATACAAATGAATCTCAC 529 Query 22205 GTCAATTTTC-CATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGAT 22263 | ||| | |||| | || | | | | | | | || || ||| | || || || Sbjct 528 G-CAACGCCCTCATATC-CGACTTATTAAAGAAAATCGTAAATGATTGAGTTTGGTCAAT 471 Query 22264 AAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGT 22323 ||| || || |||||||| ||||| | || || || || ||||| ||||| || || Sbjct 470 AAAAGCACCACGATCGGCTGCCATGTCCATTAAAGTCTTCACTGACATCTCCCAAACAGT 411 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATT 22383 || |||| || | | | | ||| ||| || || | || || || |||| ||| Sbjct 410 TTTATACAATTTTCGTACATGTTCCGGAATCTCTTTAATATTTTGCACTGAGCCGTAATT 351 Query 22384 GTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGAC 22443 | || || || | | || | ||||| | ||| | | | ||||||| || || Sbjct 350 CAGGATAATTTTATCTATGATATCTTTATTCCAAAGACCAAGGTCAATCAAATCATTAAC 291 Query 22444 CAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGC--GT-TGGTAAATGTT 22500 || ||||||||||| | ||| ||||| | ||| ||| | || | ||| || | Sbjct 290 CAAATGACGGTTCAGAATAAAAAATTCGCCAGCCAAAACGTTTCTAGTGTAGTACATAT- 232 Query 22501 GGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGG 22560 | |||| || || | |||||||| || |||| || || | ||||| || ||||| Sbjct 231 --ACTTGAAGGGCTCAATCGATTCATTATTACCCAAAATTTGTGACGTCGACGCAGTCGG 174 Query 22561 CATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCAT 22620 ||| || ||||| | || || || | | || | ||| | |||||| || || Sbjct 173 CATTGGGGCCAATAATAATGAATTACGAACTCCATACTTGGCTATTTTAGCTTTCAGTTC 114 Query 22621 CGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC 22680 | ||| ||||| | ||| | || || || |||||||||| || |||| | || Sbjct 113 GGTCCAATCCCATAAATCAGTTGGAGTT---TTACCCCACATATCATACTGCAGAATACC 57 Query 22681 GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCAT 22721 |||| | || || || | ||| |||||||||||||||| Sbjct 56 TTGACTTACAGGACTACCGTAGTATGTTTCGTACGGACCAT 16 >seq18871 Length=4271 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || |||||||| || | || || || | || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| |||||| || ||| ||||||||||| | ||||| || ||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 |||||| |||| || ||||| ||||| | || || | || | | | |||||||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGA-TGGCCGAACGTTATCTGATTATAA 2074 Query 31372 CATTCAAAAAGAATCGACT 31390 |||||||||||||| ||| Sbjct 2073 TATTCAAAAAGAATCCACT 2055 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| ||||| || | || || ||||| || || | || ||||||| || Sbjct 2760 CATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATC 2701 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| || ||| || ||| ||| || ||||| | || || || || Sbjct 2700 AGATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCA 2641 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || | || |||||||| |||||||||||||| ||| | |||||||| Sbjct 2640 ACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAA 2581 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || || ||||| || || Sbjct 2580 TATTCAGAAAGAATCCACCCTCCATCTAGTTCT 2548 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||| | || || |||||||| || | || || || | || Sbjct 3214 ATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCT 3155 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | ||| |||||| ||||| | ||||| || || Sbjct 3154 GACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAA 3095 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || |||| || ||||||||||| || |||||| || | ||| || ||| Sbjct 3094 CAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACAAC 3035 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 || ||||| ||||| ||||| ||| ||||| Sbjct 3034 ATCCAAAAGGAATCTACTCTGCATTTGGTA 3005 >seq41170 Length=8096 Score = 96.9 bits (106), Expect = 3e-15 Identities = 277/421 (66%), Gaps = 4/421 (1%) Strand=Plus/Minus Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 || ||||| |||| || ||||| ||||| || | ||| ||||||||||| |||| | Sbjct 6531 CCTAAATTTTTCTGATTACTTTTGCGATTACAGGCATCTTTGTAGAGCATAAACGGGTTA 6472 Query 23168 CCCGTCTCGACCTGCG-ACTC-GATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225 || || || | || | | || || || | | || ||| ||| | ||| || | Sbjct 6471 CCAGTTTCCATTTGAGCAATCAGAATTTCATTGAATAAATT-TCT-AGCCTTAACTCGGC 6414 Query 23226 GCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAAC 23285 | | ||| |||| |||| ||| || |||| ||| | ||| || |||| |||| ||| Sbjct 6413 GGATGTAATTGCCATCTTGCTCATATTTTTCGTAAAGCGCTTCGAATTTTTCACCCCAAC 6354 Query 23286 AGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAA 23345 | || || |||||| | || | || ||||| | ||||| || | |||| Sbjct 6353 ACTCATTCAAGCCGGGACACTGACTAGGGCACATCAAGCTCCAGTCACCATCGTCATCAA 6294 Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405 | || |||| || | ||| |||||||||| || |||| || ||||| |||| | Sbjct 6293 CACGCTTCATGAACAAATCTGGTATCCATAAGGCCAAGAAAAGGTCGCGACAACGCATTT 6234 Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465 || | |||| ||||| || | | ||| || || | ||||||||||| |||| Sbjct 6233 GTTCGTCGCCGTCATTCTTCCGTAAGTTGAGAAATTCGAAAATTTCCGCATGCCATGGCT 6174 Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525 | | |||| ||| | | || ||||| | || ||||| ||||| || || | |||| Sbjct 6173 CTAAATAAATGGCTATAGAACCAGGTCTTCTGTTACCGCCTTGATCCACATATTGTGCCG 6114 Query 23526 T 23526 | Sbjct 6113 T 6113 >seq87437 Length=6430 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 ||||| ||||| |||||||| || || | || || ||||| || || | || || || Sbjct 294 TCAAA-ATGCAGATTTTCGTGAAAACGTTAACTGGTAAAACAATTACGCTTGAGGTCGAG 352 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 | || || | | |||| || || || ||| | | | |||||||| | || || Sbjct 353 TCATCAGATACAATTGAAAATGTTAAGGCAAAGATTCAAG-ATAAGGAAGGAATTCCTCC 411 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 ||||||||||| ||||||| ||||| ||||| || || ||| | || | || || Sbjct 412 AGACCAGCAGCGCTTAATATTTGCTGGAAAACAATTAGAGGACGGTCGAACGTTAAGTGA 471 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| ||||| || |||||||| | ||||| || Sbjct 472 TTATAATATTCAGAAGGAATCGACATTGCATCTAGT 507 >seq47143 Length=13737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/203 (69%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 ||||| ||||||||||| || || ||| | || || ||||| || || | || || || Sbjct 1045 TCAAA-ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAG 987 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || ||||| | | |||| || ||| || ||| || |||||||| | || || Sbjct 986 CCATCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCA 927 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 || || || || |||||||||| || ||||| | ||||| | || ||| || Sbjct 926 GATCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGAC 867 Query 31367 TATAACATTCAAAAAGAATCGAC 31389 ||||| ||||| |||||||| || Sbjct 866 TATAATATTCAGAAAGAATCCAC 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445237314287760