Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq27572 91.5 2e-13 seq54457 87.8 2e-12 seq5310 86.0 8e-12 >seq27572 Length=212 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722 |||||| || || || || || ||||| | |||||||| |||| || || | || Sbjct 2 ACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATTT 61 Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782 |||||| ||| ||| | ||||| || | | |||||| || ||||| ||||| | Sbjct 62 CGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGAT 121 Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842 || || || || || | ||||| || || || ||| | |||||| | ||| ||||| Sbjct 122 TCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAATA 181 Query 62843 ATTAATATCTATAATTTTATTGAGATTT 62870 ||| || ||||||||||| |||||| Sbjct 182 ATTGCGGTCGATAATTTTATTCAGATTT 209 >seq54457 Length=626 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722 |||||| || || || || || ||||| | |||||||| |||| | || | || Sbjct 229 ACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATTT 288 Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782 |||||| ||| ||| | ||||| || | | |||||| || ||||| ||||| | Sbjct 289 CGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGAT 348 Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842 || || || || || | ||||| || || || ||| | |||||| | ||| ||||| Sbjct 349 TCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAATA 408 Query 62843 ATTAATATCTATAATTTTATTGAGATTT 62870 ||| || ||||||||||| |||||| Sbjct 409 ATTGCGGTCGATAATTTTATTCAGATTT 436 >seq5310 Length=1504 Score = 86.0 bits (94), Expect = 8e-12 Identities = 188/279 (67%), Gaps = 11/279 (4%) Strand=Plus/Plus Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||||| || || ||||| ||||| ||||| | || || |||||| ||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33758 || ||||| || || ||||| ||||| || | || || | || | | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT- 33817 ||||| ||| ||||||||||| |||||||| ||||| || ||||| || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 33818 --AAAGAGATAGtttttttCATTACT-ATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 || || || || ||| | | | ||||| | | ||| |||| || || Sbjct 676 AAAAGGAAATCACGTTCTTCTGGATTCGTGATTAAC----GACTGGATTAAAATACCGTA 731 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCC 33913 |||||||| |||||| ||| || ||||||||||| Sbjct 732 CATTTCCGCATGAATCGATTCTATTTGAATCTGAAATCC 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629070061617840