Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5310 118 1e-21 seq41171 109 5e-19 >seq5310 Length=1504 Score = 118 bits (130), Expect = 1e-21 Identities = 261/391 (67%), Gaps = 3/391 (1%) Strand=Plus/Plus Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 || || ||| || |||||||| ||||| || |||| || |||||| || || Sbjct 264 TAGTCGATCGGCAACGAATTCAATATAAGTAGCCATTTTGTCACTCGACATACCGATCAG 323 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577 | || |||| ||| | || || || ||||| | | || || ||| | || Sbjct 324 AGTGACAGGAAGCGCATCACACAGGAATTCTTTTTCGAGCTGGACAGCTTCACGAAAGAT 383 Query 11578 CGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAA 11637 | | | |||| ||| | ||| ||| || ||||| | | | | || |||||||| Sbjct 384 CTTCTTAATAATTTCTTCAGAAGGTTTCTGGTTCAAATGATGATAGAGTAGGCACGCAAA 443 Query 11638 ATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCAT 11697 | |||||| |||||||||| | ||| |||||||| ||| | || || ||||| Sbjct 444 CTGACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAGCCAGGCAT 503 Query 11698 CAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTC 11757 || | ||||||||| | ||| |||||||| ||||| || || ||||| || || || Sbjct 504 TAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAAATGCCTTC 563 Query 11758 CACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTGCTAGATATCCATTT 11814 ||||| ||||| || | | | ||| || || | || | | || |||||||| Sbjct 564 GACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAAATCCATTT 623 Query 11815 TCTGGCCCAATCAGCTTTCTTTTTTACGCAT 11845 | ||||||||| ||||||||||| || ||| Sbjct 624 TAAGGCCCAATCGGCTTTCTTTTTAACACAT 654 >seq41171 Length=1454 Score = 109 bits (120), Expect = 5e-19 Identities = 320/485 (66%), Gaps = 15/485 (3%) Strand=Plus/Minus Query 36919 ATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATA 36978 || || | ||||||| |||| || ||||| ||||| | ||||||||||| || | || Sbjct 496 ATCGTAAATGATTGAGTTTGGTCAATAAAAGCACCACGATCGGCTGCCATGTCCAT--TA 439 Query 36979 CATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAAT 37036 | | || | || ||||||||||| |||||||| | || | || || || || | | Sbjct 438 AAGTCTTCACTGACATCTCCCAAACAGTTTTATACAATTTTCGTACATGTTCCGGAATCT 379 Query 37037 CT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCC 37093 || | || ||| | || || | || | | |||| ||| | || || ||||||| Sbjct 378 CTTTAATATTTTGCACTGAGCCGTAATTCAGGATAATTTTATCTATGATATCTTTATTCC 319 Query 37094 ACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCC 37151 | | | | | | || | || | | | || | || | || ||| || || Sbjct 318 AAAGAC--CAAGGTCAATCAAATCATTAACCAAATGACGGTTCAGAATAAAAAATTCGCC 261 Query 37152 AGATAATACTCTTCTTGTATA-TATAT-TGCTAGTATATGGTTCAATGGACTCATTATTA 37209 || || || |||| || || || || | || | | || ||||| || ||||||||| Sbjct 260 AGCCAAAACGTTTCTAGTGTAGTACATATACTTGAAG--GGCTCAATCGATTCATTATTA 203 Query 37210 CTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAAT 37269 | || ||||| || || || ||||| |||||||| || | || | ||| | | | Sbjct 202 CCCAAAATTTGTGACGTCGACGCAGTCGGCATTGGGGCCAATAATAATGAATTACGAACT 143 Query 37270 CCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTT 37329 |||| | ||| | ||| ||||| |||||||||||||||| ||||| | || Sbjct 142 CCATACTTGGCTATTTTAGCTTTCAGTTCGGTCCAATCCCATAAATCAGTTGGAGTTTTA 83 Query 37330 AACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAA 37389 |||||||||||| || |||||||||| ||| | ||| | ||| ||||| || || Sbjct 82 CCCCACATATCATACTGCAGAATACCTTGACTTACAGGACTACCGTAGTATGTTTCGTAC 23 Query 37390 GGTCC 37394 || || Sbjct 22 GGACC 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467968702058320