Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq54457 96.9 5e-15 seq27572 93.3 6e-14 seq5310 93.3 6e-14 >seq54457 Length=626 Score = 96.9 bits (106), Expect = 5e-15 Identities = 218/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Plus Query 65455 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 65514 ||||||| || || || || || ||||| | ||||| || |||| | || | || Sbjct 228 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATT 287 Query 65515 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 65574 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 288 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 347 Query 65575 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 65634 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 348 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 407 Query 65635 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTC-AGT 65693 |||| || ||||||||||| |||||| | | | | ||| | || || ||| | | Sbjct 408 AATTGCGGTCGATAATTTTATTCAGATTTTTCGCCACAAATTTAGCAACCTCTTTCAAAT 467 Query 65694 TTGAGAAAATCAAAT---CGCTC--ATCTA-TTACAAACATGTTCAATGCAACAGATGCC 65747 || ||||| || || ||||| | | | ||||||| | || | |||| ||||| Sbjct 468 GTGTGAAAA-CATATTTGCGCTCAGAACGATTTACAAATTTATTGACAGCAATTGATGCT 526 Query 65748 AGATTACAAACGGCTACCTCAT 65769 | || |||||||| | ||||| Sbjct 527 AAGTTGCAAACGGCGATCTCAT 548 >seq27572 Length=212 Score = 93.3 bits (102), Expect = 6e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 65455 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 65514 ||||||| || || || || || ||||| | ||||| || |||| || || | || Sbjct 1 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATT 60 Query 65515 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 65574 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 61 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 120 Query 65575 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 65634 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 121 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 180 Query 65635 AATTAATATCTATAATTTTATTGAGATTT 65663 |||| || ||||||||||| |||||| Sbjct 181 AATTGCGGTCGATAATTTTATTCAGATTT 209 >seq5310 Length=1504 Score = 93.3 bits (102), Expect = 6e-14 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||||| || || ||||| ||||| ||||| | ||||| ||| || |||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT--- 36334 || ||||| || |||||||| ||||| || | || || | ||| | | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| ||| ||||||||||| |||||||| ||||| || || || || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 36395 AAGAG 36399 || || Sbjct 676 AAAAG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657391606476520