Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq18871 118 1e-21 >seq18871 Length=4271 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||| || ||||||||||| | || || ||||||||||| |||||||| Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || || ||||| |||||| | || | ||| |||||||| || || Sbjct 2086 AACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGA 2145 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| |||| | ||| | | ||| | ||| || | || ||| || Sbjct 2146 ATACCTTCCTTGTC-TTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGAC 2204 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||| || || |||||||| || ||||| ||||||||| Sbjct 2205 TTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCATA 2253 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| |||||||| || || || || | ||||| || ||||| ||||| || ||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||| | ||||| |||||| | || | ||||| ||||| || || Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| ||||||| || | | ||| | |||||| | | ||| || Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACT 3167 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||| || || || || ||||| || ||||||||||| Sbjct 3168 TCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || ||||| || ||||| || | || || || || ||||| || ||||| Sbjct 2760 GCCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAGA 2818 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||| || | |||||| |||||| | || | || |||||||| || || Sbjct 2819 TAATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGG 2878 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| ||| || ||| | | ||| | |||||| | | |||||| Sbjct 2879 AATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCAC 2938 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || ||||||||||| || || ||||| Sbjct 2939 TTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||||| || | ||||| || | || || ||||| ||||| |||||||| Sbjct 2533 CCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGAT 2592 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||||||| | |||| ||||| ||||| || || Sbjct 2593 AAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGA 2652 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | |||| | | ||| | || || | | || || Sbjct 2653 ATACCTTCTTTATC-CTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAAC 2711 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || || |||||||| || |||||||| Sbjct 2712 TTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495475215437600