Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq5310 122 8e-23 >seq5310 Length=1504 Score = 122 bits (134), Expect = 8e-23 Identities = 332/503 (66%), Gaps = 4/503 (1%) Strand=Plus/Plus Query 13585 GATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTG-ATATATTTTCC 13643 |||||||| ||| | |||||||||||| || | || || ||| | || || | Sbjct 149 GATATTCAGAAACGCGTTTTTCAAAGAAATTCGAGACACGTT-TTGTGCAAATCAGTTGC 207 Query 13644 ATAAAATCAAATGGATTTATTGACAT-AAACACTTTATCACAACCTAGTTCTAATAGTAA 13702 ||||| | ||| |||||| | ||| | ||| || | |||| ||||| | |||| Sbjct 208 ATAAATTTAAACGGATTTGAAG-CATGATACATTTGAGTACAATTTAGTTGCAGCAGTAG 266 Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762 || ||| |||| || |||||||| || |||| |||| |||||| || || | Sbjct 267 TCGATCGGCAACGAATTCAATATAAGTAGCCATTTTGTCACTCGACATACCGATCAGAGT 326 Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822 ||||||| || | ||||||||||| | ||||| || | || | Sbjct 327 GACAGGAAGCGCATCACACAGGAATTCTTTTTCGAGCTGGACAGCTTCACGAAAGATCTT 386 Query 13823 TGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 13882 ||||||| || | |||||| | || | ||| | | | | || |||||||| | Sbjct 387 CTTAATAATTTCTTCAGAAGGTTTCTGGTTCAAATGATGATAGAGTAGGCACGCAAACTG 446 Query 13883 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 13942 |||||| || || || | |||||||| || ||| | || || ||||| || Sbjct 447 ACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAGCCAGGCATTAA 506 Query 13943 TCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAAC 14002 | ||||||||| | ||| ||||| || ||||| ||||| ||||| || || || || Sbjct 507 GCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAAATGCCTTCGAC 566 Query 14003 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14062 || ||||| || || | ||||| || || | ||| || | || || ||||||||| Sbjct 567 AGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAAATCCATTTTAA 626 Query 14063 AGCCCATTCAGAtttttttttAA 14085 ||||| || | ||| ||||||| Sbjct 627 GGCCCAATCGGCTTTCTTTTTAA 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479158604840200