Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5310 141 9e-29 >seq5310 Length=1504 Score = 141 bits (156), Expect = 9e-29 Identities = 353/531 (66%), Gaps = 4/531 (1%) Strand=Plus/Plus Query 13373 GATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTG-ATATATTTTCC 13431 |||||||| ||| | ||||||||| || || | || || ||| | || || | Sbjct 149 GATATTCAGAAACGCGTTTTTCAAAGAAATTCGAGACACGTTTT-GTGCAAATCAGTTGC 207 Query 13432 ATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAA 13490 ||||| | || ||||||| | ||| | ||| || | |||| ||||| | | || Sbjct 208 ATAAATTTAAACGGATTTGAAG-CATGATACATTTGAGTACAATTTAGTTGCAGCAGTAG 266 Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550 || ||| |||| || |||||||| || |||| |||| |||||| || || | Sbjct 267 TCGATCGGCAACGAATTCAATATAAGTAGCCATTTTGTCACTCGACATACCGATCAGAGT 326 Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610 ||||||| || | | ||||||||||| | ||||| || | || | Sbjct 327 GACAGGAAGCGCATCACACAGGAATTCTTTTTCGAGCTGGACAGCTTCACGAAAGATCTT 386 Query 13611 CTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 13670 ||||||||| || | |||||| | || | ||| | | | | || |||||||| | Sbjct 387 CTTAATAATTTCTTCAGAAGGTTTCTGGTTCAAATGATGATAGAGTAGGCACGCAAACTG 446 Query 13671 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 13730 |||||| || || || | |||||||| || ||| | || || ||||| || Sbjct 447 ACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAGCCAGGCATTAA 506 Query 13731 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 13790 | ||||||||| | ||| ||||| || || || |||||| ||||| || || || || Sbjct 507 GCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAAATGCCTTCGAC 566 Query 13791 TGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCT 13850 || ||||| || || || ||||| || || | ||| || | ||||| ||||||||| Sbjct 567 AGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAAATCCATTTTAA 626 Query 13851 AGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAA 13901 ||||| || | ||| ||||||| | | || || |||||||||||| Sbjct 627 GGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTGAA 677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478020756970920