Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq27572 102 1e-16 seq54457 98.7 1e-15 seq5310 98.7 1e-15 >seq27572 Length=212 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 71417 CACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 71476 ||||||| || || || ||||||||||| | ||||| ||||||| || || | || Sbjct 1 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATT 60 Query 71477 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 71536 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 61 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 120 Query 71537 CGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 71596 || || || || || | |||| || || || ||| | |||||| | ||| |||| Sbjct 121 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 180 Query 71597 AATTAATATCTATAATTTTATTGAGATTT 71625 |||| || ||||||||||| |||||| Sbjct 181 AATTGCGGTCGATAATTTTATTCAGATTT 209 >seq54457 Length=626 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 71417 CACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 71476 ||||||| || || || ||||||||||| | ||||| ||||||| | || | || Sbjct 228 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATT 287 Query 71477 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 71536 |||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 288 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 347 Query 71537 CGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 71596 || || || || || | |||| || || || ||| | |||||| | ||| |||| Sbjct 348 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 407 Query 71597 AATTAATATCTATAATTTTATTGAGATTT 71625 |||| || ||||||||||| |||||| Sbjct 408 AATTGCGGTCGATAATTTTATTCAGATTT 436 >seq5310 Length=1504 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||||| || || ||||| ||||| ||||||| ||||| ||| || ||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT--- 42241 || ||||| || |||||||| ||||| || | || || | ||| | | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| ||| ||||||||||| |||||||| ||||| || ||||| || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 42302 AAGAG 42306 || || Sbjct 676 AAAAG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670342616494280