Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq64532 118 2e-21 seq74070 87.8 3e-12 >seq64532 Length=2006 Score = 118 bits (130), Expect = 2e-21 Identities = 236/343 (69%), Gaps = 10/343 (3%) Strand=Plus/Plus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTAT-GTAGA 70125 || ||| | || || | || ||||| || |||||||||| ||| |||||||| || || Sbjct 1040 GGTGATTTAGGCCCTATTTATGGATTTCAATGGAGGCACTTTGGCGCCAAGTATTGTGGA 1099 Query 70126 CTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 ||||||| | | ||| | | || |||||||||| || | | ||||| || | Sbjct 1100 ATGCGAGAAA-ATTATGATAATAAAGGAATTGATCAATTACAAAATGTTATTGATACCAT 1158 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCC--TGCAGATTTG 70243 |||| ||||||| ||||| ||||| |||||| | |||||||| ||||| ||| Sbjct 1159 TAAGAATAATCCAAATGATAGAAGGATAATAATGTCAGCCTGGAATCCGATGCAG--TTG 1216 Query 70244 CACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACG--ATGGCA 70301 | ||||||| || || || || || || |||| |||||||| ||| |||| Sbjct 1217 CCAGAAATGGCGCTTCCTCCATGCCATTGCTTGGTGCAGTTTTAT--GTAGCTAATGGAT 1274 Query 70302 AATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACA 70361 | || || || | ||||||| | || ||||||||| | || || || || || | Sbjct 1275 ATTTATCGTGTCAATTGTATCAACGTTCCGCTGACATGGGCTTAGGAGTTCCTTTCAATA 1334 Query 70362 TTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 |||||||||| || | || || | ||| | ||||| || || Sbjct 1335 TTGCAAGCTACGCTTTATTAACTTATATGGTAGCTCATATAAC 1377 >seq74070 Length=7602 Score = 87.8 bits (96), Expect = 3e-12 Identities = 167/246 (68%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 |||||| || || ||||| | || |||||||||| || || ||||||||||| || | Sbjct 3035 TTTGCGATAGAATATGACAGCTGCACGAGGACCTCGCAGTGTTTTGTGCGTTGTTGTCAT 2976 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAAT 127220 ||| | ||| |||| ||||| || | ||||| | || | || | || |||| || Sbjct 2975 TACAGTATCAGAATAATCAAAAGGACTTGGAATCAAATTAGCTGCCACTAATCCCGAAAC 2916 Query 127221 GTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCT 127280 ||||| ||||||| || ||| || | | |||| || |||||||| | | Sbjct 2915 GTGTGACATATCGGAATGCAAATAGGCCCCTGTTTCATCACATATTTCTCGGAACTTTTT 2856 Query 127281 ATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340 ||||| | | || | ||| |||||| |||| || | || | | ||||||||||| Sbjct 2855 GTAGTCTAGCAGACGCGAATAACAACTGATGCCAGCAACAATAATGTTCGGTTTGAATAG 2796 Query 127341 ATTGGC 127346 || || Sbjct 2795 TTTTGC 2790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740179627572280