Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq47143 141 7e-29 seq87437 123 2e-23 seq18871 118 8e-22 >seq47143 Length=13737 Score = 141 bits (156), Expect = 7e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| || ||||| | |||| ||||| ||||||||||| || || || | |||| Sbjct 828 TAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATC 887 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || | ||||||||| || ||||| |||||||| || || |||| | |||||| ||||| Sbjct 888 TTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATC 947 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||| || | ||| ||||| | ||||| || || | |||||| || Sbjct 948 TTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGT 1007 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||| |||||||| |||||||| |||||||| Sbjct 1008 TTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq87437 Length=6430 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || || |||||||||||||| |||| || | || || ||||||||||| |||||| Sbjct 489 TCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAAT 430 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || || || |||||||| |||| | ||||| |||||| ||| ||| || || | Sbjct 429 ATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTT 370 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||||||| | ||| || || | ||||||||||||||| ||||| || ||||| Sbjct 369 TCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACG 310 Query 44111 AATATTTGCAT 44121 || || ||||| Sbjct 309 AAAATCTGCAT 299 >seq18871 Length=4271 Score = 118 bits (130), Expect = 8e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 43918 ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTG 43977 ||| || ||| ||||| |||||||||||||| ||| || |||| ||||| || Sbjct 2556 ATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCTTCCAACTG 2615 Query 43978 TTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTT 44037 ||| || || || ||||||||||| || || | || | |||||||||||| |||||| Sbjct 2616 TTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGAATTTT 2675 Query 44038 TTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGT 44097 ||| || | ||| ||||||| | || || || | ||| |||||||| || || Sbjct 2676 CGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGTTTTTCCAGT 2735 Query 44098 TAAAGTCTTCACAAATATTTGCATGTCG 44125 ||| || || ||||| ||||||||| || Sbjct 2736 TAATGTTTTTACAAAAATTTGCATGCCG 2763 Score = 114 bits (126), Expect = 9e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||||||||||||||| ||| || |||| || | ||||||||| ||||| Sbjct 2062 TCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAA 2121 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || || || ||||| || | || | |||||| || ||| |||||| |||||| | Sbjct 2122 ATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTT 2181 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||||||| | ||| || || | ||| || ||||| || || || |||||||| Sbjct 2182 TCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACG 2241 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 2242 AAAATTTGCAT 2252 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || || || ||||| || || || ||| ||| ||| | || Sbjct 3002 TAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTC 3061 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || |||||||| || ||||| || || ||||| || || | || | |||||||| || Sbjct 3062 TTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTC 3121 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 |||||| || || | ||| || || | | ||| || || | ||||| || Sbjct 3122 CTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGT 3181 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||| |||||||| ||||||||||||||||| Sbjct 3182 TTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || | ||| | ||||| ||||| | ||| ||||| || ||||| ||||| Sbjct 2253 ACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCGA 2312 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | || |||| ||||||||||| || ||||| || || |||||||| || | || Sbjct 2313 AAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCGG 2372 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| ||||| |||||| ||||| | ||| |||||| | |||||||| Sbjct 2373 AATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCAC 2432 Query 44074 ATCGACCGTAATTGTTTTACC 44094 || | ||||| |||||||| Sbjct 2433 TTCAAGTGTAATAGTTTTACC 2453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354367037281044