Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_005841.1 Length=41391 Score E Sequences producing significant alignments: (Bits) Value seq56214 389 1e-103 >seq56214 Length=539 Score = 389 bits (430), Expect = 1e-103 Identities = 406/532 (76%), Gaps = 1/532 (0%) Strand=Plus/Minus Query 40408 TCATATCGCGCTGGGGAGAGTGGTGTTAAAACTTGGCAAGGTACTGTGGGCTCGACAACC 40467 ||||| || || |||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 531 TCATACCGAGCCGGGGAGAGCGGAGTTAAGACATGGCAGGGAACCGTAGGCTCCACAACA 472 Query 40468 TCTCGCAACTATAATCTGCAATTCCGCGACTCGGTCGTTATTTACCCCGTATGGGACGGA 40527 || || || |||||||| ||||| || || || || ||| | ||||| |||||||| ||| Sbjct 471 TCACGAAATTATAATCTTCAATTTCGTGATTCCGTAGTTTTGTACCCGGTATGGGATGGA 412 Query 40528 TTCGATTTAGGTGCTGACACTGACATGAATCCGGAGTTGGACAGGCCTGGGGACTACCCT 40587 ||||||||||| || || || |||||||||||||| ||| ||||||||||| |||||| Sbjct 411 TTCGATTTAGGCGCAGATACCGACATGAATCCGGAAGCGGATAGGCCTGGGGATTACCCT 352 Query 40588 ATAACCCAATACCCACTGCATCAGTTACCCCTAAATCACCTGATTGATAATCTTCTGGTT 40647 || |||| |||||| | ||| | | || |||| || |||| || ||||| | ||| Sbjct 351 GTATCCCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGTT 292 Query 40648 CGCGGGGCGTTAGGTGTAGGTTTTGGTATGGATGGTAAGGGCATGTATGTGTCTAATATT 40707 | || || | || |||||||| |||||||| || | || ||||||| ||||| || Sbjct 291 AGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATA 232 Query 40708 ACCGTAGAAGATTGCGCTGGCTCTGGCGCGTACCTACTCACCCATGAATCAGTATTTACC 40767 ||||| |||||||||||||| ||||| || || | || |||| ||| ||||||| || Sbjct 231 ACCGTCGAAGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACT 172 Query 40768 AATATAGCCATAATTGATACCAATACTAAGGATTTCCAGGCTAATCAGATTTATATATCT 40827 ||||| || ||||| || ||||||||||| | |||| || || ||||| || || || Sbjct 171 AATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATACATCTCG 112 Query 40828 GGGGCTTGCCGTGTGAACGGTTTACGTTTAATTGGGATCCGCTCAACCGATGGGCAGGGT 40887 ||||| |||||||| ||||| |||| || | || ||||| ||||| | ||||| Sbjct 111 GGGGCATGCCGTGTTAACGGCCTACG-TTGGTCGGCATCCGGTCAACTACCGAACAGGGC 53 Query 40888 CTAACCATAGACGCCCCTAACTCTACCGTAAGCGGTATCACCGGGATGGTAG 40939 || || |||||||| |||||||| || || |||||||| ||||| | |||| Sbjct 52 CTTACGATAGACGCGCCTAACTCCACTGTGAGCGGTATAACCGGCTTCGTAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132180389526458