Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq5642 196 6e-45 seq64532 138 1e-27 >seq5642 Length=9115 Score = 196 bits (216), Expect = 6e-45 Identities = 371/545 (68%), Gaps = 16/545 (3%) Strand=Plus/Minus Query 164446 ATTTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGC 164505 || |||||||| || ||||| || ||| | || |||||| | || ||||||| Sbjct 8113 ATATTCAGACGTGCTTTTGCATCCAGAGTTTTCCCGCCTGAAATAGTTGAACAATTAGGT 8054 Query 164506 TGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATG 164565 || ||| | ||||| |||||| || | || || || || || ||||| || ||| Sbjct 8053 TGCCGTCATGTCAAAGGTATTTTACTATACGGGCCGCCCGGAACGGGAAAAACTTTGATG 7994 Query 164566 GCTCGATGCATTGC--TCAAGCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTG 164623 ||||| || | ||| | || || | || || ||||| || || || ||| Sbjct 7993 GCTCGTCAGATCGGAGTCATG--TTGAATGCACGGCCACCGAAAATCGTAAACGGCCCTC 7936 Query 164624 AATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGG 164683 | | ||| | |||||||| |||||||| || || ||| | | |||||| || | Sbjct 7935 AGATTTTGGATAAATATGTTGGTGAGTCGGAGGCGAATATACGGCGCTTGTTTGCAGATG 7876 Query 164684 CTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATG 164743 |||| |||||| | |||||| ||| |||| ||| || |||| ||||||||| Sbjct 7875 CTGAGGAAGAAGAGAAGAAACTGGGTCCCTATAGTGGATTGCACATTATCATTTTTGATG 7816 Query 164744 AGATAGATGCTCTTTGCAA---AAAACGT---------GGTGATAATATTATTCATGATG 164791 | || ||||| ||||||| || | || ||| || | | | || ||| Sbjct 7815 AAATCGATGCGATTTGCAAGTCAAGAGGTTCAGCTACTGGTAGTACTGGTGTCCACGATA 7756 Query 164792 CAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAA 164851 | || ||||||||||||||||| ||||| |||||||| ||| |||||||| |||| | Sbjct 7755 CCGTTGTTAATCAGTTGCTTTCGAAAATCGATGGTGTTGAACAATTAAATAACGTTTTGA 7696 Query 164852 TTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGAT 164911 | |||| ||||| || || ||| | |||||||| ||||| | ||||| ||||| | Sbjct 7695 TAATAGGCATGACAAATCGCAAAGATATGATTGATGAAGCTTTGCTGCGACCCGGTCGTT 7636 Query 164912 TAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAG 164971 | || | |||| ||||| |||||||| ||| || ||||||| | || ||| | ||| Sbjct 7635 TTGAGGTACAAATGGAAATTGGATTACCGGACGAAAAAGGACGTTTGCAGATTCTCAAAA 7576 Query 164972 TTCAT 164976 ||||| Sbjct 7575 TTCAT 7571 >seq64532 Length=2006 Score = 138 bits (152), Expect = 1e-27 Identities = 243/341 (71%), Gaps = 16/341 (5%) Strand=Plus/Minus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 ||||| | | ||| |||||||| || || || | ||| ||||| || ||||| ||| Sbjct 1371 TGAGCTACCATATAAGTTAATAAAGCGTAGCTTGCAATATTGAAAGGAACTCCTAAGCCC 1312 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAA-AT--ATTGTCTATAGCATAAAAT 7014 || || || || | |||||| ||||||| |||||| || ||| ||| ||||||| Sbjct 1311 ATGTCAGCGGAACGTTGATACAATTGACACGATAAATATCCATTAGCTA---CATAAAAC 1255 Query 7015 TGACACAATACATGACATGGAGGTAAAACAGCCTGATCTAT-ATCAG-AT-GGATTCCAA 7071 || ||| ||| |||||||| || ||| ||| | | | || |||||||| Sbjct 1254 TGCACCAAGCAATGGCATGGAGG---AAGCGCCATTTCTGGCAACTGCATCGGATTCCAG 1198 Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTA-TAATTATTTG 7130 || | ||||| || | ||||||||||||||| || ||||| | | | ||| |||| Sbjct 1197 GCTGACATTATTATCCTTCTATCATTTGGATTA-TTCTTAATGGTATCAATAACATTTTG 1139 Query 7131 TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATA-TAATTAGCTCCAA 7189 ||||||||| || || | | |||||||| | | || | | | || || || |||| Sbjct 1138 TAATTGATCAATTCCTTTATTATCATAATTT-TCTCGCATTCCACAATACTTGGCGCCAA 1080 Query 7190 AATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 | || ||||||||||| ||||||||||| |||||||||||| Sbjct 1079 AGTGCCTCCATTGAAATCCATAAATAGGGCCTAAATCACCT 1039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595164752074800