Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq18871 138 1e-27 seq47143 123 2e-23 seq87437 109 5e-19 >seq18871 Length=4271 Score = 138 bits (152), Expect = 1e-27 Identities = 184/256 (72%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 94756 TAACGGTTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGA 94815 ||||| |||| |||| | | || || || | || || || ||||| |||| |||||| Sbjct 2963 TAACGTTTTTACAAAAATCTGCATCCCGCCACGTAAACGTAATACCAAATGCAGAGTAGA 3022 Query 94816 TTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAA 94875 ||||||||| | ||| || ||| | || | || || | ||||| || |||| Sbjct 3023 TTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAA 3082 Query 94876 GATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGC 94935 ||||||| ||| |||||||| ||||| ||||||||||| | ||||||||||| ||| Sbjct 3083 AATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTT 3142 Query 94936 GCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995 | | ||||||| ||||| || | || || ||||| ||||| | ||||||||| Sbjct 3143 TTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCAC 3202 Query 94996 AAAGATCTGCATGCTT 95011 ||| || ||||| ||| Sbjct 3203 AAATATTTGCATTCTT 3218 Score = 125 bits (138), Expect = 6e-24 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 |||| | ||| || | || || || || ||||||||||| ||||| ||||| | |||| Sbjct 2018 TTTAGATTCCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTAT 2077 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 |||| ||| ||| | |||||| || |||||||| |||| ||||| | ||||| Sbjct 2078 AATCAG--ATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTG 2135 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 |||||| ||||||||||| ||||| | |||||| || ||||| | | || || | Sbjct 2136 ATCTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGA 2195 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | ||| || |||||||| || | || ||||| || || ||||| Sbjct 2196 GGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || || | ||| |||||||| || ||||| || ||||| || || | Sbjct 2242 AAAATTTGCATACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATA 2301 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| | ||| | ||| |||| ||||| || |||| ||||||| |||| Sbjct 2302 TTGTAATCCGAAAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGC 2361 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||| || ||||||||||| || || | |||||| ||||||||| Sbjct 2362 TGATCAGGCGGAATACCTTCCTTATCCTGAATTTTAGCCTTGACG 2406 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | |||||||| | ||| | ||| |||| |||||| || Sbjct 2563 GTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCTTCCAACTGTTTACCA 2622 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | || || || | ||| |||||||| |||||||||||||| || | |||||| || || Sbjct 2623 GCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGAATTTTCGCTTTA 2682 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | || || | || || || || | ||| || ||||||||||| | ||| Sbjct 2683 ACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGTTTTTCCAGTTAATGTT 2742 Query 94991 TTCACAAAGATCTGCATGC 95009 || ||||| || ||||||| Sbjct 2743 TTTACAAAAATTTGCATGC 2761 Score = 98.7 bits (108), Expect = 9e-16 Identities = 176/254 (69%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 94756 TAACGGTTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGA 94815 ||| | |||| |||| ||| || || || | ||| || || || || ||||| || || Sbjct 2736 TAATGTTTTTACAAAAATTTGCATGCCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA 2795 Query 94816 TTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCA 94873 | |||| || | || ||||| ||| ||| || ||||| | |||||| || || Sbjct 2796 T-CCTTCTGAATATTGTAATCAG--ATAATGTGCGACCGTCCTCTAACTGTTTGCCAGCA 2852 Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 || ||||| | ||||||||||| |||||||| |||||||| | || || || || || Sbjct 2853 AAAATTAACCGCTGCTGATCTGGTGGAATACCCTCTTTGTCCTGGATCTTGGCTTTAACA 2912 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 | | ||||| | || || || | || || ||||||||||| | ||||| Sbjct 2913 TTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTT 2972 Query 94994 ACAAAGATCTGCAT 95007 ||||| |||||||| Sbjct 2973 ACAAAAATCTGCAT 2986 >seq47143 Length=13737 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94790 AATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849 || || || || || ||||| || ||||| || || | ||||| || ||| || | Sbjct 823 AAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTT 882 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||| || || ||||||||| | || ||||| | ||| |||||||||||||||||||| Sbjct 883 CCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCC 942 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 || || | |||||| || || || | | || || | | ||||| |||| ||| Sbjct 943 TTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTA 1002 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| | |||||||||||| || ||||| Sbjct 1003 ATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq87437 Length=6430 Score = 109 bits (120), Expect = 5e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCT 94862 ||||| || |||||||| || | |||||||| || || ||| || ||||| | | Sbjct 501 TGCAATGTCGATTCCTTCTGAATATTATAATCACT--TAACGTTCGACCGTCCTCTAATT 444 Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922 ||||||| |||| ||||| | ||||| ||||||||||| ||||| || || | ||| | Sbjct 443 GTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCT 384 Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982 ||||||| || | | || || | ||||| |||| ||| || ||||| |||| Sbjct 383 TTGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAG 324 Query 94983 TAAGAGTTTTCACAAAGATCTGCATGCTTACAA 95015 | | |||||||| || |||||||| | |||| Sbjct 323 TTAACGTTTTCACGAAAATCTGCATTTTGACAA 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447759117571080