Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq66805 176 7e-40 seq72204 161 2e-35 seq14913 161 2e-35 seq1597 154 2e-33 seq52038 145 1e-30 seq13838 113 7e-21 seq17040 109 9e-20 >seq66805 Length=2617 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| |||||||| || || || || || ||||| ||| Sbjct 2062 GCGAAGCGTCATCGCAAAGTACTTCGTGATAACATTCAGGGCATTACGAAACCAGCGATC 2121 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| | |||||||||||||| ||||||||| |||| ||||| |||| ||||| | Sbjct 2122 CGTCGTTTAGCTCGTCGTGGTGGCGTCAAGCGTATCTCAGGATTAATCTACGAAGAAACG 2181 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| |||| | ||||| | | || || | ||||| || || || ||| Sbjct 2182 CGAGGAGTTCTGAAAGTATTCCTGGAAAATGTGATTCGGGATGCGGTCACGTACACTGAG 2241 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || ||||| || || ||||| | ||||| | ||||| |||||||||||||| || Sbjct 2242 CATGCGAAACGCAAAACCGTCACTGCAATGGACGTTGTCTACGCATTGAAACGTCAGGGG 2301 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | | |||||||| || ||||| Sbjct 2302 CGCACGTTATATGGTTTCGGCGGTTAA 2328 >seq72204 Length=3138 Score = 161 bits (178), Expect = 2e-35 Identities = 190/257 (74%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||||||||| | ||||| || ||||||||||| || || ||||| || |||||| Sbjct 3138 AAGCGTCATCGCAAAGTACTTCGCGACAACATCCAAGGCATTACGAAGCCCGCAATCCGT 3079 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||| |||||||||| ||||| |||||||| |||| || || | ||||| || | || Sbjct 3078 CGTTTGGCTCGTCGAGGTGGCGTCAAGCGGATCTCAGGCCTGATTTATGAGGAAACGCGC 3019 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | |||| |||| | ||||| ||| || || | || || || || || || ||| Sbjct 3018 GGTGTTCTGAAAGTGTTCCTGGAGAATGTAATACGAGACGCAGTCACGTACACAGAACAC 2959 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 ||||| || || || || || | ||||| | || || |||||||||||||| |||||| Sbjct 2958 GCTAAGCGCAAAACCGTTACAGCAATGGACGTTGTTTACGCATTGAAACGTCAGGGCCGT 2899 Query 16676 AAGATTTATGGTTTTGG 16692 | | | || ||||| || Sbjct 2898 ACGTTATACGGTTTCGG 2882 >seq14913 Length=571 Score = 161 bits (178), Expect = 2e-35 Identities = 198/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| ||||||||||| |||||||| ||||| || || || || Sbjct 357 GCGAAGCGGCACCGCAAGGTGCTTCGAGATAATATCCAAGGCATCACAAAACCGGCAATT 298 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||||| || ||||| ||||| ||| | || || || | || ||||| | Sbjct 297 CGCCGATTGGCTCGACGCGGTGGCGTCAAACGTATTTCCGGCCTGATTTACGAAGAAACA 238 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 || | |||| | || | |||||| ||| ||| ||| ||||| || || ||||| || Sbjct 237 CGAGGTGTTCTCAAAGTATTCCTCGAGAACGTGATCAGAGATGCCGTTACA-TATACGGA 179 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||| || | ||||| |||| ||||| ||||||||||| || Sbjct 178 GCACGCAAAGCGCAAGACTGTTACTGCAATGGACGTCGTGTATGCGTTGAAACGTCAGGG 119 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | |||| |||||||| ||||| Sbjct 118 TCGCACGCTTTACGGTTTTGGCGGTTAA 91 >seq1597 Length=584 Score = 154 bits (170), Expect = 2e-33 Identities = 190/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | ||||| || ||||||||||| || || ||||| || ||| Sbjct 82 GCGAAGCGTCATCGTAAAGTACTTCGTGACAACATCCAAGGCATTACGAAGCCCGCGATC 141 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| |||||||||| ||||| |||||||| |||| || || | ||||| || | Sbjct 142 CGTCGTTTGGCTCGTCGAGGTGGCGTCAAGCGGATCTCAGGCCTGATTTATGAGGAAACG 201 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| |||| | ||||| ||| || || | || || || || || || Sbjct 202 CGCGGTGTTCTGAAAGTGTTCCTGGAGAATGTAATACGAGACGCAGTCACGTACACAGAA 261 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| || || || || || | ||||| | || || ||||| |||||||| ||| Sbjct 262 CACGCTAAGCGCAAAACCGTTACAGCAATGGACGTTGTTTACGCATTAAAACGTCAGGGC 321 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | || |||||||| Sbjct 322 CGTACATTATACGGTTTTGG 341 >seq52038 Length=853 Score = 145 bits (160), Expect = 1e-30 Identities = 188/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || || ||||||| | || || ||||||||||| || || || || || || || Sbjct 535 GCGAAACGACATCGCAAAGTGCTGCGTGATAACATCCAGGGCATTACGAAACCGGCAATT 594 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| |||||||||||||||| || || ||| |||| || ||| | || ||||| | Sbjct 595 CGTCGCTTGGCTCGTCGTGGTGGTGTGAAACGTATCTCGGGTTTGATTTACGAAGAAACG 654 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| |||| | ||||| | | ||| || | ||||| | || || || Sbjct 655 CGTGGCGTTCTGAAAGTTTTCCTGGAAAACGTGATTCGAGATGCCGTTACGTACACAGAA 714 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| || ||||| ||||| | ||||| | || || |||||||| ||||| ||| Sbjct 715 CACGCTAAGCGCAAGACCGTCACAGCAATGGACGTTGTGTACGCATTGAAGCGTCAGGGC 774 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | ||||||||||| Sbjct 775 CGCACTTTGTATGGTTTTGG 794 >seq13838 Length=4092 Score = 113 bits (124), Expect = 7e-21 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 16483 GCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTA 16542 ||| || ||||||||| |||||||||| ||||| |||||||| |||| || || | || Sbjct 1 GCCCGCAATCCGTCGTTTGGCTCGTCGAGGTGGCGTCAAGCGGATCTCAGGCCTGATTTA 60 Query 16543 TGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCA 16602 ||| || | || | |||| |||| | ||||| ||| || || | || || || Sbjct 61 TGAGGAAACGCGCGGTGTTCTGAAAGTGTTCCTGGAGAATGTAATACGAGACGCAGTCAC 120 Query 16603 CTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 || || || || ||||| || || || || || | ||||| | || || |||||||| Sbjct 121 ATACACAGAACATGCTAAGCGCAAAACGGTTACAGCAATGGACGTTGTTTACGCATTGAA 180 Query 16663 ACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||| ||||||| | | || ||||| || Sbjct 181 ACGTCAGGGCCGTACGTTATACGGTTTCGG 210 >seq17040 Length=265 Score = 109 bits (120), Expect = 9e-20 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 16483 GCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTA 16542 ||| || ||||||||| |||||||||| ||||| || ||||| |||| || | | || Sbjct 265 GCCCGCAATCCGTCGTTTGGCTCGTCGAGGTGGCGTTAAGCGGATCTCAGGCCTAATTTA 206 Query 16543 TGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCA 16602 |||||| | || | |||| |||| | ||| | ||| || || | || || || Sbjct 205 TGAAGAAACGCGCGGTGTTCTGAAAGTGTTCTTGGAGAATGTAATACGAGACGCAGTCAC 146 Query 16603 CTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 || || || |||||||| || || || || || | ||||| | || || |||||||| Sbjct 145 GTACACAGAACACGCTAAGCGCAAAACCGTTACAGCAATGGACGTTGTTTACGCATTGAA 86 Query 16663 ACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||| ||||||| | || |||||||| Sbjct 85 ACGTCAGGGCCGTACATTATACGGTTTTGG 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78988383807429