Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_006940.2 Length=40793 Score E Sequences producing significant alignments: (Bits) Value seq56214 524 2e-144 >seq56214 Length=539 Score = 524 bits (580), Expect = 2e-144 Identities = 439/534 (82%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 31043 CTACGAAGCCGGTTATACCACTTACCGTGGAGTTAGGCGCGTCTATCGTCAACCCCTGTC 31102 ||||||||||||||||||| || || ||||||||||||||||||||||| | |||||| Sbjct 1 CTACGAAGCCGGTTATACCGCTCACAGTGGAGTTAGGCGCGTCTATCGTAAGGCCCTGTT 60 Query 31103 CACTAGTGGAGCGTATGCCTACCAAACGAAGACCGTTCACACGGCAGGCCCCGGAGATGT 31162 | |||| || || ||||| ||||| || || ||||| |||||||| ||||| ||||||| Sbjct 61 CGGTAGTTGACCGGATGCCGACCAA-CGTAGGCCGTTAACACGGCATGCCCCCGAGATGT 119 Query 31163 AGATCTGATTCGCTGGAAAATCTTTAGTATTTGTGTCGATTATAGCAATATTAGTGAATA 31222 | ||||| ||||| || || | ||||||||| ||||||||||| || ||||||||||||| Sbjct 120 ATATCTGGTTCGCAGGGAAGTTTTTAGTATTGGTGTCGATTATTGCGATATTAGTGAATA 179 Query 31223 CCGTTTCGTGAGTAAGAAGATATGCACCCGAACCAGCGCAATCCTCGACGGTTATGTTAG 31282 | |||||||| | ||||| ||| || || |||||||||||||| |||||||||||||||| Sbjct 180 CTGTTTCGTGGGCAAGAATATAAGCCCCAGAACCAGCGCAATCTTCGACGGTTATGTTAG 239 Query 31283 AGACATACAGACCTTTCCCATCCATGTCGAAACCTACGCCCAAAGAACCCCTAACCAGTA 31342 ||||||||||||||| ||| ||||| |||||||||| |||| ||||| ||||| | || Sbjct 240 AGACATACAGACCTTGCCCGTCCATACCGAAACCTACCCCCAGCGAACCTCTAACAAATA 299 Query 31343 GATTGTCGATCAAATGGTTTAGGGGGAGCATATGTACCGGGTATTGAGAATAC-GGGAAA 31401 ||||||| ||||||||||||| |||||||||||||| ||||| || | |||| ||| || Sbjct 300 GATTGTCTATCAAATGGTTTAACGGGAGCATATGTACTGGGTACTG-GGATACAGGGTAA 358 Query 31402 TCCCCCGGGCGGTCATCTTCTGGGTTCATGTCGGTATCTGCGCCTAAATCGAAGCCGTCC 31461 ||||| || | || |||| || ||||||||||||||||||||||||||||| || ||| Sbjct 359 TCCCCAGGCCTATCCGCTTCCGGATTCATGTCGGTATCTGCGCCTAAATCGAATCCATCC 418 Query 31462 CATACAGGGTATAGCACCGCCGAATCCCGGAATTGCAGGTTGTAGTTACGAGAGGTCGTA 31521 ||||| ||||| | || | ||||| || ||||| || || || || || || || || Sbjct 419 CATACCGGGTACAAAACTACGGAATCACGAAATTGAAGATTATAATTTCGTGATGTTGTG 478 Query 31522 GAACCTACCGTGCCTTGCCATGTTTTAACACCACTTTCGCCGGCGCGATACGAG 31575 || ||||| || || |||||||| ||||| || || || ||||| || || ||| Sbjct 479 GAGCCTACGGTTCCCTGCCATGTCTTAACTCCGCTCTCCCCGGCTCGGTATGAG 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130268947238430