Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq18871 114 1e-20 >seq18871 Length=4271 Score = 114 bits (126), Expect = 1e-20 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||||||||||||||||||| | || || | ||| | ||| ||| | Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAA-CAATC 2701 Query 26829 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || ||||| || | || ||| || ||| || |||||||| || || || ||||| Sbjct 2700 AGATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCA 2641 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 |||| | | |||| || || ||||| | ||||||| | ||| | | | || |||| Sbjct 2640 ACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCG-AACTTTATCTGATTATA 2582 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 | ||||| |||||||| || ||||||| || || | || |||| |||| Sbjct 2581 ATATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGGAA 2531 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| ||||| |||||||| ||| |||| || | ||| | || ||| Sbjct 3215 AATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATC 3156 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || || ||| || ||||||||||| || || || ||||| Sbjct 3155 TGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCA 3096 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCA-GCGACTATA 26946 |||| || | |||| | ||||||||| | ||||| | | |||| | |||||| | Sbjct 3095 ACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCG-TACGTTATCCGACTACA 3037 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||| ||||| ||||||||| | ||| |||| Sbjct 3036 ACATCCAAAAGGAATCTACTCTGCATTTGGT 3006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478094269614160