Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq64532 141 2e-28 >seq64532 Length=2006 Score = 141 bits (156), Expect = 2e-28 Identities = 248/352 (70%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||| | || || |||| |||||||||||| | |||||||| || | || Sbjct 1039 AGGTGATTTAGGCCCTATTTATGGATTTCAATGGAGGCACTTTGGCGCCAAGTATTGTGG 1098 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAAT 111607 |||| || |||||| | |||| |||||||||||| ||||| |||||| || Sbjct 1099 AATGCGAGAAAATTATGATAATAAAGGAATTGATCAATTACAAAATGTTATTGATACCAT 1158 Query 111608 TAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA-TTGG 111666 |||||| || |||| | | | | || || ||| || ||||| || ||||| ||| Sbjct 1159 TAAGAATAATCCAAATGATAGAAGGATAATAATGTCAGCCTGGAATCC-GATGCAGTTGC 1217 Query 111667 AAAAAATGGCACTTCCACCATGTCAT--CTTATGTGCCAGTTTTATGTACACGACGGGAT 111724 | ||||||| ||||| ||||| ||| ||| ||| |||||||||||| | | |||| Sbjct 1218 CAGAAATGGCGCTTCCTCCATGCCATTGCTT-GGTG-CAGTTTTATGTA-GCTAATGGAT 1274 Query 111725 GCTT-TCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATA 111783 || || || ||| ||||||| || || ||||| || || | || ||||| || |||| Sbjct 1275 ATTTATCGTGTCAATTGTATCAACGTTCCGCTGACATGGGCTTAGGAGTTCCTTTCAATA 1334 Query 111784 TTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAA 111835 ||||||| ||||| || | |||| | | |||||| | || || || || Sbjct 1335 TTGCAAGCTACGCTTTATTAACTTATATGGTAGCTCATATAACTAAGCTTAA 1386 Score = 102 bits (112), Expect = 2e-16 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 111311 TCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCT 111370 ||| ||||| | || || ||||| ||| | |||| || |||| |||||| | || Sbjct 289 TCAATTTCCGTTGCTGACCACAAAACGAGTTTTTTGGCGAGGTGTTGTTGAAGAATTACT 348 Query 111371 GTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCA-AAAAATGTAAAAATTT 111429 ||||||||||| || || || ||||| ||||||| || || | |||||| | | |||| Sbjct 349 TTGGTTTATTCGTGGTAGCACCAATGCTAATGAAC-TGAAGGAGAAAAATATCCATATTT 407 Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCA 111464 ||||| |||| | |||||||| |||||||||||| Sbjct 408 GGGATCAAAATAGTTCACGTGAATTTCTAGATTCA 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301767959153246