Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq18871 111 1e-19 >seq18871 Length=4271 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || |||||| |||| || | |||||||||||| Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | |||||| || ||| ||||| ||||| || || || ||||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||| | | |||| | || || ||||| || |||| | ||| ||| | | |||||||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAA-CGTTATCTGATTATAA 2074 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||||||||||| || | || ||||| ||| | || | || ||| | ||| Sbjct 2073 TATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGAATCTAA 2019 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| |||||||| ||| ||||||| | ||||||||| | Sbjct 3215 AATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATC 3156 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || ||| || ||||||||||| || || || ||||| Sbjct 3155 TGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCA 3096 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCA-GCGATTATA 24168 ||| || | |||| | ||||| ||| | ||||| | | | |||| | ||| || | Sbjct 3095 ACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCG-TACGTTATCCGACTACA 3037 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| ||||| |||||||| | ||||| || ||| Sbjct 3036 ACATCCAAAAGGAATCTACTCTGCATTTGGTATTA 3002 Score = 105 bits (116), Expect = 6e-18 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||||||||||||||||||| | || || | ||||| || | | | Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGA-ACAATC 2701 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| || | || ||| || ||| || |||||||| || || || ||||| Sbjct 2700 AGATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCA 2641 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 ||| | |||||| || || || || | ||||||| | | ||| | | | ||||||| Sbjct 2640 ACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCG-AACTTTATCTGATTATA 2582 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | ||||| |||||||| || | ||| |||| Sbjct 2581 ATATTCAGAAAGAATCCACCCTCCATCTAGT 2551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429438460997715