Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq18871 102 7e-17 seq47143 87.8 2e-12 >seq18871 Length=4271 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 || ||||||||| ||||| ||||| | || || ||||| ||||| | ||| ||||| Sbjct 3218 AAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTC 3159 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||| ||| | | || || |||||| || |||||||| | || || Sbjct 3158 ATCTGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGA 3099 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| ||| || | |||| ||| ||||||||||||||||| | | || | |||| || Sbjct 3098 TCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTA 3039 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||| ||||| || |||||| | ||| |||| || Sbjct 3038 CAACATCCAAAAGGAATCTACTCTGCATTTGGTATT 3003 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || ||| | ||||||||||| || || | ||| ||| || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || ||| |||||| || || ||||| | || |||||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | | |||| ||| || |||||| | || |||| | ||| | | |||||||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAAT 2073 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| || ||| | || | || || | || || || |||| Sbjct 2072 ATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGAA 2024 >seq47143 Length=13737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 || ||||||||||||||||| ||||| | || || ||||||||||| | ||| ||| Sbjct 1046 TTCAAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAG 987 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | ||| || ||| | | || ||| |||||| ||||| ||||| | || Sbjct 986 CCATCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCA 927 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| ||| | | || | || || |||||| ||||||||| | ||| || || Sbjct 926 GATCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGAC 867 Query 115460 TATAACATTCAAAAAGAGTCTAC 115482 ||||| ||||| ||||| || || Sbjct 866 TATAATATTCAGAAAGAATCCAC 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424851775042360