Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq87437 127 2e-24 seq18871 122 8e-23 seq5310 84.2 2e-11 >seq87437 Length=6430 Score = 127 bits (140), Expect = 2e-24 Identities = 171/234 (73%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| ||||||||| || || | |||| ||| | ||||| ||||| ||||| || ||| Sbjct 531 ATGACGCCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAA 472 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || || | || || |||||||| || || || || | ||||| ||||||||||| Sbjct 471 TCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCT 412 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGA 131180 ||||| |||||||| || || ||| | | || ||| | | || | ||||| | || Sbjct 411 GGAGGAATTCCTTCCTTATC-TTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGA 353 Query 131181 CTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || | |||| |||||||| |||| ||||| |||||||||||||| Sbjct 352 CTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCAT 299 >seq18871 Length=4271 Score = 122 bits (134), Expect = 8e-23 Identities = 169/230 (73%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GC 131065 ||| ||||||||||| | |||||||| | |||||| ||||| ||||| |||||||| | Sbjct 2760 GCCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAGA 2818 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| |||| |||||||| ||| ||||| || | ||||| |||||||| || || | Sbjct 2819 TAATG-TGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTG 2877 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCG 131184 | || || |||||||| ||| || |||| | | | || | || || | ||||| Sbjct 2878 GAATACCCTCTTTGTCCTGGATCTTG-GCTTTAACATTTTCAATTGTGTCTGAAGACTCC 2936 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | ||||| || |||| |||||||| ||||||||||| Sbjct 2937 ACTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || ||||| | || ||||| | || || |||||||| |||||||| ||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| |||| || ||||| || | ||||| || || || || || || Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| |||||| ||| | | || | || || | ||||||| Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACT 3167 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| |||| |||||| || || || ||||| Sbjct 3168 TCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 |||||||| || || | ||||| || | || || || |||||||| || ||||| | | Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | | || | ||||| || || || || || | |||||||||||||| || || || Sbjct 2086 AACGTTCGGCCA-TCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGG 2144 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| |||| | || | ||||| | || ||||| Sbjct 2145 AATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGAC 2204 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || | || || |||||||| ||||| Sbjct 2205 TTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 >seq5310 Length=1504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGAT--CAACAGCAGCACCGCGACTTTCGCCGAGC 46156 |||||| |||| ||||| | || ||||| ||| | ||| | || || |||| || | Sbjct 644 AAGAAAGCCGATTGGGCCTTAAAATGGATTTCAA-ATCAGAAT-GCAACATTCGGTGAAC 587 Query 46157 GTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCT 46216 | || | || |||||| ||| || ||| | || || || || ||||||||||| || | Sbjct 586 GGCTGATTGCTTTTGCGGCTGTCGAAGGCATTTTCTTCTCCGGAAGTTTTGCCGCTATAT 527 Query 46217 TTTACATCAAAACCAAGG--GCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATC 46274 | | |||||| || | || | ||||| ||| || | |||||||| || || ||||| Sbjct 526 TCTGGCTCAAAA--AACGACGCTTAATGCCTGGCTTGTCTTTTAGCAATGAACTTATATC 469 Query 46275 GCGCGACGAGGG 46286 ||| ||||| || Sbjct 468 GCGTGACGAAGG 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471452562107520