Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq18871 132 3e-26 seq44470 131 1e-25 seq20256 131 1e-25 seq47658 113 3e-20 seq87437 109 4e-19 seq47143 100 2e-16 seq44471 95.1 8e-15 seq41215 89.7 3e-13 seq7677 82.4 5e-11 >seq18871 Length=4271 Score = 132 bits (146), Expect = 3e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38100 AAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGT 38159 ||||| || |||||||| ||||| |||||||| || ||||| || || || ||| Sbjct 2997 AAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGG 3056 Query 38160 TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCT 38219 |||| ||||||||||| || ||||| |||| ||||||||||| | || | |||||| Sbjct 3057 CCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCT 3116 Query 38220 TTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTA 38279 |||||| |||||| ||| || || | | || || || ||||| || ||| Sbjct 3117 TTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTA 3176 Query 38280 ATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||||||| || || |||||||| ||||| ||||| Sbjct 3177 ATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 109 bits (120), Expect = 4e-19 Identities = 161/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | |||||| || || ||||| | || | ||||| ||||||||||||||||| Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGAT 2819 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || |||| ||||| ||||| || ||||| |||| || || ||||| | || Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || ||||||||| || || || ||||| | | || ||| | || ||| Sbjct 2880 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACT 2939 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| |||||||| || || || ||||| || || |||||||| Sbjct 2940 TCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 104 bits (114), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || || || || || || | |||| || ||||||||||| |||||||| Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 38151 AAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 | ||||||| || || | ||||||||| ||||| |||| || || ||||| | Sbjct 2086 A----ACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGG 2141 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 || | ||||| ||||| |||||| || ||||| | | |||||| || Sbjct 2142 CGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTC 2201 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || || ||||| |||||||| || |||||||| || ||||| Sbjct 2202 GACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 98.7 bits (108), Expect = 7e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | |||||||||||| ||||| | || || || || ||||||||||| | Sbjct 2252 TACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCG 2311 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || |||||||| || ||||| |||| ||||| ||||| | | Sbjct 2312 AAAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCG 2371 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || ||| |||||| ||| || || | | |||||| || | Sbjct 2372 GAATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCA 2431 Query 38269 CTTCTAATGTAATAGTTTTACC 38290 |||| | ||||||||||||||| Sbjct 2432 CTTCAAGTGTAATAGTTTTACC 2453 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| | || | || | ||| || ||| || || |||||||| |||| Sbjct 2529 CATT-CCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAAT 2587 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| ||| || | || || || ||||| || || || || | ||||||||||| | Sbjct 2588 CAGATAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTG 2647 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||| ||| |||||| || || || | | |||||| || Sbjct 2648 GTGGAATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTT 2707 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||||||||| || || ||||| || || || ||||| || || || |||||| Sbjct 2708 CAACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCATG 2760 >seq44470 Length=2021 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||| ||||||||| | || |||||||| Sbjct 747 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAAAGTAGATAGAGACAACGGAAATCTCGT 806 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 807 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 841 >seq20256 Length=4980 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||| ||||||||| | || |||||||| Sbjct 4786 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAAAGTAGATAGAGACAATGGAAATCTCGT 4727 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4726 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4692 >seq47658 Length=1447 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||||||||||||||| ||||||||| | || |||||| | Sbjct 195 AAGCCCGTTCCCTTAAATGTGGTTTCGCTAGAAAGTAGATAGAGACAATGGAAATCTCAT 254 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 255 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 289 >seq87437 Length=6430 Score = 109 bits (120), Expect = 4e-19 Identities = 145/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| |||||||| |||||| || || |||| |||||||||||||| |||||| Sbjct 489 TCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAAT 430 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 |||| ||| || || || | || | ||||| || || ||| ||| ||| ||||| Sbjct 429 ATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTT 370 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | |||||| || || || | ||||| |||||||| || || ||||||||| Sbjct 369 TCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACG 310 Query 38307 AATATCTGCATGTTTTACAA 38326 || |||||||| ||| |||| Sbjct 309 AAAATCTGCAT-TTTGACAA 291 >seq47143 Length=13737 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||||| || || ||||| | ||| || || |||||||| || ||| | Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | | || |||| |||||||||||| ||||||| ||||||||||| | || Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| || || |||||| || ||||| | | ||||| || ||| Sbjct 934 ATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACT 993 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | ||||| |||||||| || || |||||||| || || ||||| || Sbjct 994 TCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTT 1043 >seq44471 Length=882 Score = 95.1 bits (104), Expect = 8e-15 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 826 CTCTCTCTTCAGAGTGCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 882 >seq41215 Length=1933 Score = 89.7 bits (98), Expect = 3e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 19951 CTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTA 20010 ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct 361 CTCTTCAGAGTGCTTTTCAACTTTCCCTCACAGTACTTGTTCGCTATCGGTCTTGTGGTT 302 Query 20011 ATATTTAGCCTT 20022 |||| || ||| Sbjct 301 GTATTAAGTCTT 290 >seq7677 Length=6220 Score = 82.4 bits (90), Expect = 5e-11 Identities = 187/282 (66%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 ||||| |||||||| || |||||| | || ||||| || ||||| ||| || ||||| Sbjct 1489 CCGACAAAATATTTTGGCTGCGAATTAGGTGCTCAAACTCAGTTCGATTTAAAGAACGAT 1548 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 || | || ||||| || || ||| | || || || | || || | | || || ||| Sbjct 1549 CGATATATTGTTAATGGTTCACATGATTCGGCTAAATTACAAGATCTTTTAGATGGTTTT 1608 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCT 6500 ||| || | ||| |||||| || || || || || || || || | | ||| Sbjct 1609 ATTAAGAAATATGTTTTGTGTCCAGAGTGTGAAAATCCTGAAACTGAATTGACAGTG--- 1665 Query 6501 ACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGAT 6560 |||| | | |||| ||| |||| ||||| ||||||| |||||| || | Sbjct 1666 ---AAGAAAGGTAGCATCAGTCAAAGCTGTAAAGCATGCGGTTTCCATGGAGTTTTGAAG 1722 Query 6561 TTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCCA 6602 | || || | ||||| | ||| ||||||||||| ||| Sbjct 1723 TCCATTCATAAGTTGAACACTTACATTCTGAAGAATCCGCCA 1764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334559585806943