Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq27572 98.7 1e-15 seq54457 96.9 4e-15 seq5310 89.7 7e-13 >seq27572 Length=212 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 ||||||| || || || || || ||||| | ||||| || |||| || || | || Sbjct 1 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATT 60 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 ||||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 61 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 120 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 121 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 180 Query 62646 AATTAATATCTATAATTTTATTGAGATTT 62674 |||| || ||||||||||| |||||| Sbjct 181 AATTGCGGTCGATAATTTTATTCAGATTT 209 >seq54457 Length=626 Score = 96.9 bits (106), Expect = 4e-15 Identities = 218/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Plus Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 ||||||| || || || || || ||||| | ||||| || |||| | || | || Sbjct 228 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATT 287 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 ||||||| ||| ||| | ||||| || | | |||||| |||||||| ||||| | Sbjct 288 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 347 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 || || || || || | ||||| || || || ||| | |||||| | ||| |||| Sbjct 348 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 407 Query 62646 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTC-AGT 62704 |||| || ||||||||||| |||||| | | | | ||| | || || ||| | | Sbjct 408 AATTGCGGTCGATAATTTTATTCAGATTTTTCGCCACAAATTTAGCAACCTCTTTCAAAT 467 Query 62705 TTGAGAAAATCAAAT---CGCCC--ATCTA-TTACAAACATGTTCAATGCAACAGATGCC 62758 || ||||| || || ||| | | | | ||||||| | || | |||| ||||| Sbjct 468 GTGTGAAAA-CATATTTGCGCTCAGAACGATTTACAAATTTATTGACAGCAATTGATGCT 526 Query 62759 AGATTACAAACGGCTACCTCAT 62780 | || |||||||| | ||||| Sbjct 527 AAGTTGCAAACGGCGATCTCAT 548 >seq5310 Length=1504 Score = 89.7 bits (98), Expect = 7e-13 Identities = 131/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||||| || || ||||| ||||| ||||| | ||||| ||| || |||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 32837 || ||||| || |||||||| ||||| || | || || | || | | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| ||| ||||||||||| |||||||| ||||| || || || || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 32898 AAGAG 32902 || || Sbjct 676 AAAAG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632879934258800