Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq18871 150 2e-31 seq47143 129 5e-25 seq87437 98.7 9e-16 >seq18871 Length=4271 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||||||||| || ||||| || |||||| | || || | ||||| ||||| Sbjct 3218 AAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTC 3159 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || || | ||| ||||||| ||||||||||| ||||| || || Sbjct 3158 ATCTGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGA 3099 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | |||||||| ||||||||||||||||| | || || | ||| || Sbjct 3098 TCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTA 3039 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| || ||||| ||||| || || ||||| || Sbjct 3038 CAACATCCAAAAGGAATCTACTCTGCATTTGGT 3006 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||| || || || || ||| | || || | ||||| || || Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | | |||| |||| ||| || |||||||| |||||||| || || Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAG-GATAAAGAAGGTATTCCACCAGATCA 2641 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| ||| | ||||| || || ||||| || ||||||| || ||| | ||||| || Sbjct 2640 ACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAA 2581 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||| ||||||||||| || ||| |||| ||| ||||| |||| |||| Sbjct 2580 TATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGGAA 2531 Score = 127 bits (140), Expect = 2e-24 Identities = 158/212 (75%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||| || || || || ||| | || ||| | ||||||||||| || Sbjct 2986 ATGCAGATTTTTGTAAAAACGTTAACTGGAAAAACTATAACATTGGAAGTGGAGTCTTCA 2927 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || |||| || | || |||||||| || |||||||| || Sbjct 2926 GACACAATTGAA--AATGTTAAAGCCAAGATCCAG-GACAAAGAGGGTATTCCACCAGAT 2870 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | |||||||| |||||||| ||||| || | |||||| | |||||| Sbjct 2869 CAGCAGCGGTTAATTTTTGCTGGCAAACAGTTAGAGGACGGTCGCACATTATCTGATTAC 2810 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||| | ||| ||| || | |||||||| Sbjct 2809 AATATTC-AGAAGGATCGACCTTGCATTTAGT 2779 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || ||| | || || | ||||| ||| | || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| ||||| ||||| ||||| || || Sbjct 2192 GATACAATTGAAAATGTCA---AAGCGAAAATTCAA-GACAAGGAAGGTATTCCGCCAGA 2137 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | |||||||| || |||||| | || |||| || || | ||||| Sbjct 2136 TCAGCAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTA 2077 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||||||||||||||| | || ||||| Sbjct 2076 TAATATTCAAAAAGAATCCACTTTGCACTTAGT 2044 Score = 114 bits (126), Expect = 1e-20 Identities = 139/187 (74%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCA 25081 |||||| | || ||| | ||||||||| | || || ||||| || |||| | || Sbjct 2453 GGTAAAACTATTACACTTGAAGTGGAGCCATCGGATACTATTGAAAACGTCA---AGGCT 2397 Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141 |||| ||| || || ||||| ||||| ||||| || || || | |||||||| || || Sbjct 2396 AAAATTCAG-GATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAA 2338 Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 |||||| ||||||| || ||| | ||||||||||| || |||||||| ||| | || Sbjct 2337 ACAATTGGAAGATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCA 2278 Query 25202 TTTAGTG 25208 ||||||| Sbjct 2277 TTTAGTG 2271 >seq47143 Length=13737 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || ||||| || |||||| |||| || | ||||| ||| | || Sbjct 1041 AATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCATC 982 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || | || |||| |||| ||| || || ||||| ||||| || || Sbjct 981 CGATACGATTGAA--AATGTTAAAGCGAAAATTCAA-GATAAGGAAGGTATTCCTCCAGA 925 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| ||| | || || ||||| |||||| ||||||||| | || || || || Sbjct 924 TCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTA 865 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| |||||||||||| | |||||||| Sbjct 864 TAATATTCAGAAAGAATCCACGTTGCATTTAGT 832 >seq87437 Length=6430 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || || || |||||| | || || | || || ||||| || Sbjct 298 AATGCAGATTTTCGTGAAAACGTTAACTGGTAAAACAATTACGCTTGAGGTCGAGTCATC 357 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || | ||| |||| | ||| || || ||||| ||||| || |||| Sbjct 358 AGATACAATTGAAAATGTTAAGGCAAAGATTCAA-GATAAGGAAGGAATTCCTCCAGACC 416 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||| || ||||||||||| || | ||| || | | ||||| | Sbjct 417 AGCAGCGCTTAATATTTGCTGGAAAACAATTAGAGGACGGTCGAACGTTAAGTGATTATA 476 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||| || ||||| || | ||| |||| Sbjct 477 ATATTCAGAAGGAATCGACATTGCATCTAGT 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432826535640695