Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq47143 158 1e-33 seq18871 158 1e-33 seq41171 100 2e-16 seq5310 93.3 4e-14 >seq47143 Length=13737 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||||||||| ||||||||||| |||||||| | || |||||||| || | Sbjct 1043 AAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCA 984 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||||||| | || || | ||| ||||||||||| ||||| |||||||| || ||| Sbjct 983 TCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGAT 924 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||||| | ||||| ||||| ||||| |||| ||| | || | || || Sbjct 923 CAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTAT 864 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||||||||| | |||||||| || || || ||||| || Sbjct 863 AATATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGG 814 >seq18871 Length=4271 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || || || |||||| | || | ||||| || || | Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| ||||||||||||||||| |||||||| || ||||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || ||||| | |||||| ||| || | || ||||| || Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAAT 2073 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||||||||||| | || |||||||| || || ||||| || Sbjct 2072 ATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGG 2026 Score = 147 bits (162), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| |||||||| ||||| ||||| || ||||| | || | |||||||| | | Sbjct 2987 GATGCAGATTTTTGTAAAAACGTTAACTGGAAAAACTATAACATTGGAAGTGGAGTCTTC 2928 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | ||| || || || ||||| |||||||||||||| ||||| Sbjct 2927 AGACACAATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCACCAGATCA 2868 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || | || ||||| ||||||||||||||||| ||||| | || |||||||| Sbjct 2867 GCAGCGGTTAATTTTTGCTGGCAAACAGTTAGAGGACGGTCGCACATTATCTGATTACAA 2808 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||| | ||| ||| ||| | |||||||| || || |||||||| || Sbjct 2807 TATTC-AGAAGGATCGACCTTGCATTTAGTATTACGTTTGCGCGGCGG 2761 Score = 143 bits (158), Expect = 2e-29 Identities = 176/239 (74%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 22208 CATTTGTAAAGA-TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAA 22266 ||||| ||||| ||||||| ||||| ||||||||||| ||||||||| | ||| | ||| Sbjct 3226 CATTTTCAAAGAATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAA 3167 Query 22267 GTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATT 22326 || || | | || || | || | | || |||||| || ||||| || || ||| Sbjct 3166 GTCGAGTCATCTGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATT 3107 Query 22327 CCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTC 22386 || || ||||||||||| | || ||||| |||||||| ||||| || ||| || | Sbjct 3106 CCGCCAGATCAACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTA 3047 Query 22387 TCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| |||||||| ||||| ||||| || | ||||| || || || || || || || Sbjct 3046 TCCGACTACAACATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGG 2988 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| ||||| || ||||| | || | ||||| ||| | Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | ||| |||||||| || || || ||||||||||| |||||| Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCAA 2640 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || || |||||||| || ||| ||| || | || ||||| || Sbjct 2639 CAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAAT 2580 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| |||||||||||| | ||| ||||| Sbjct 2579 ATTCAGAAAGAATCCACCCTCCATCTAGTT 2550 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| | || ||||||||||| | | ||||| | || | |||| ||| Sbjct 2453 GGTAAAACTATTACACTTGAAGTGGAGCCATCGGATACTATTGAAAACGTCAAGGCTAAA 2394 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 ||||| || ||||| |||||||| || ||||| ||||| | || ||||| || ||||| Sbjct 2393 ATTCAGGATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAAACAA 2334 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 || || ||| ||| || | || |||||||| || || |||||||| || | |||||| Sbjct 2333 TTGGAAGATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCATTTA 2274 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || ||| Sbjct 2273 GTGTTGCGTTTGCGTGGTGGT 2253 >seq41171 Length=1454 Score = 100 bits (110), Expect = 2e-16 Identities = 278/423 (66%), Gaps = 10/423 (2%) Strand=Plus/Minus Query 128819 TGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGG 128878 |||||||||| ||||| |||||||| | ||| |||||| | || |||||| Sbjct 588 TGCGCAAATAATACATTCCTGTTTTTAGACCAAGCTTCCAACCATACAAATGAATC---- 533 Query 128879 TCAA-CAATGCG----TAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATC 128933 ||| ||| || || | || | | || ||||| ||||||||||| |||| || Sbjct 532 TCACGCAACGCCCTCATATCCGACTT-ATTAAAGAAAATCGTAAATGATTGAGTTTGGTC 474 Query 128934 AATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCCCACAC 128993 |||||| | || |||||||| ||||| | || ||| | |||||| ||| ||||| || Sbjct 473 AATAAAAGCACCACGATCGGCTGCCATGTCCATTAAAGTCTTCACTGACATCTCCCAAAC 414 Query 128994 CGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTT 129053 ||||| || | | || || |||| || || |||| ||| || ||||| ||||| Sbjct 413 AGTTTTATACAATTTTCGTACATGTTCCGGAATCTCTTTAATATTTTGCACTGAGCCGTA 354 Query 129054 GTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTC 129113 || |||||||| | | || | || || | | | || | |||||||| | Sbjct 353 ATTCAGGATAATTTTATCTATGATATCTTTATTCCAAAGACCAAGGTCAATCAAATCATT 294 Query 129114 GGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTT 129173 ||| | ||| | | ||| || || ||||||||| | | ||| | Sbjct 293 AACCAAATGACGGTTCAGAATAAAAAATTCGCCAGCCAAAACGTTTCTAGTGTAGTACAT 234 Query 129174 GTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGG 129233 | |||| ||||||| ||||||||| || || || ||||| | ||| | ||| || || Sbjct 233 ATACTTGAAGGGCTCAATCGATTCATTATTACCCAAAATTTGTGACGTCGACGCAGTCGG 174 Query 129234 CAT 129236 ||| Sbjct 173 CAT 171 >seq5310 Length=1504 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 117064 TGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTT 117123 |||| ||||| || |||||||||||||||||| || || |||||||| || ||||| | Sbjct 583 TGATTGCTTTTGCGGCTGTCGAAGGCATTTTCTTCTCCGGAAGTTTTGCCGCTATATTCT 524 Query 117124 TTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTG 117183 |||| | | | ||||||| || | | |||||||| ||| | |||||||||| Sbjct 523 GGCTCAAAAAACGACGCTTAATGCCTGGCTTGTCTTTTAGCAATGAACTTATATCGCGTG 464 Query 117184 ACGAAGGTT 117192 ||||||||| Sbjct 463 ACGAAGGTT 455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419242274100445