Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq18871 141 2e-28 seq47143 114 2e-20 seq87437 105 1e-17 >seq18871 Length=4271 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 || |||||||| || || || || || ||||||||||| || ||||| | || | || Sbjct 3000 CGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCG 3059 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 |||||||| || || || || || || | || |||||| || || ||||| ||||| ||| Sbjct 3060 TCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTG 3119 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || || |||||||| ||| || || ||||| | ||| || |||||||| || || Sbjct 3120 TCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATC 3179 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || | || || || ||||| |||||| Sbjct 3180 GTTTTACCAGTTAAAGTTTTCACAAATATTTGCATT 3215 Score = 136 bits (150), Expect = 7e-27 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| |||| ||||| | ||| || || ||||| | ||||| |||||||| || |||| Sbjct 2018 TTTAGATTCCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTAT 2077 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || | || | ||||| || | || || || || || || | | || || | Sbjct 2078 AATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGAT 2137 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||| ||||||||||||||||| || || ||||| || || || |||| | Sbjct 2138 CTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGG 2197 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || ||||||||||| | ||||| ||||| || ||||| Sbjct 2198 CCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 >seq47143 Length=13737 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| | || || || || || | |||||| ||||| || || ||||| || Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || || |||||||||| || || ||||||||||| | | |||||| || || ||| Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| |||||||| || || || || || || || || | || || ||| Sbjct 934 ATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACT 993 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | || |||||||| || || | || || || || || |||||| || Sbjct 994 TCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTG 1044 >seq87437 Length=6430 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| | ||| || || | || | || || || || || || |||||||| Sbjct 525 CCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTT 466 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || ||||| || || || || ||||| | | || ||||| || ||| Sbjct 465 AACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGA 406 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| ||||||||||||||||| || || || || |||| ||| || || Sbjct 405 ATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACC 346 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | || || ||||| || || | || || ||||| ||||||||| || Sbjct 345 TCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATTTTG 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920528514853160