Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq64532 127 2e-24 >seq64532 Length=2006 Score = 127 bits (140), Expect = 2e-24 Identities = 239/346 (69%), Gaps = 14/346 (4%) Strand=Plus/Minus Query 20242 AGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCC 20301 ||| | |||||| | |||||||||||| | | ||||| ||||| || ||||||||||| Sbjct 1378 AGTTATATGAGCTACCATATAAGTTAATAAAGCGTAGCTTGCAATATTGAAAGGAACTCC 1319 Query 20302 CAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA 20361 || |||||||| | || | ||||||| ||||| || | | || | ||||||||| Sbjct 1318 TAAGCCCATGTCAGCGGAACGTTGATACAATTGACACGATAAATATCCATTAGCTACATA 1259 Query 20362 AAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCC 20420 ||| || || | ||| || || || ||||||||||| | ||| | | ||| |||| Sbjct 1258 AAACTGCACCAAGCAA-TGGCATGGAGGAAGCGCCATTTCTGGCAACTGCATCGGATTCC 1200 Query 20421 ACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACG 20480 | || |||| || || |||||||| | |||||||| || || ||| | || | Sbjct 1199 AGGCTGACATTATTATCCTTCTATCATTTGGATTATTCTTAATGGTATCAATAACATTTT 1140 Query 20481 ACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT----CCGC-GTCCAC-GTACGCCG 20534 ||||| |||| ||| ||| ||| || ||| ||||| ||| | Sbjct 1139 GTAATTGATCAA------TTCCTTTATTATCATAATTTTCTCGCATTCCACAATACTTGG 1086 Query 20535 CCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 | |||||||||||||| || || || |||| ||| || ||||| || Sbjct 1085 CGCCAAAGTGCCTCCATTGAAATCCATAAATAGGGCCTAAATCACC 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440848929106520