Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq47143 125 2e-23 seq18871 125 2e-23 seq2483 104 6e-17 seq87437 95.1 3e-14 >seq47143 Length=13737 Score = 125 bits (138), Expect = 2e-23 Identities = 182/253 (72%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTC-TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||| | | |||| || | ||| | |||| |||||| || ||||||||||| Sbjct 814 CCACCGCGTAAACGTAAG-ACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATT 872 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 | ||| | ||| ||||||| ||||||||| ||||| || | || ||||| |||| Sbjct 873 CAACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTG---ATCTGG 929 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||| ||||| || ||||||||||| || ||||| || | |||| | || Sbjct 930 AGGAATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTC 989 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482 ||||| ||||| || || || || || | ||| || || || || |||||| || || Sbjct 990 GACTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTGAAATG 1049 Query 288483 CTAATATTTTTAA 288495 ||||||| || Sbjct 1050 AGTATATTTTAAA 1062 >seq18871 Length=4271 Score = 125 bits (138), Expect = 2e-23 Identities = 146/196 (74%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | ||| || ||||||||||||||||| || || || Sbjct 3023 TTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAA 3082 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || | || ||||| |||| || ||||||||||| ||||||||||| || || || Sbjct 3083 AATTAATCGTTGTTG---ATCTGGCGGAATTCCTTCTTTGTCCTGGATTTTTGCCTTAAC 3139 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||| || | || || || ||||| | || ||||| || || || | ||| || Sbjct 3140 GTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGTTAAAGTTTT 3199 Query 288459 GACGAATATCTGCATT 288474 || ||||| |||||| Sbjct 3200 CACAAATATTTGCATT 3215 Score = 122 bits (134), Expect = 2e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || ||||| | ||| |||||| || |||||||| || | Sbjct 2532 TCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGA 2591 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| || ||||| || ||||| |||| || |||||| ||| Sbjct 2592 TAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGG 2651 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTCTA 288424 || |||||||||||||| ||||||||||| |||||||| || | ||| | | | ||| | Sbjct 2652 AATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTG-TTCAA 2710 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| | ||| || || || || || | || || || || || ||||| Sbjct 2711 CTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| |||||||| || | | ||| || || || || | ||||||||| || || Sbjct 2061 TTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAA 2120 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || | |||||| ||| ||||| || ||||| || || || ||||||||||| || Sbjct 2121 AATTAAACGCTGCTGA---TCTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGAC 2177 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | || ||||| | ||| ||||| || || |||| ||||| Sbjct 2178 ATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTT 2237 Query 288459 GACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 2238 CACGAAAATTTGCAT 2252 >seq2483 Length=6067 Score = 104 bits (114), Expect = 6e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 325342 ATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTT 325401 ||| || ||||||||||| | || ||| ||||| || |||| |||| | |||||||| Sbjct 3564 ATCTTTGCCACCCTGCAACCGCGTACCAAACTGACCGATAGGCAGCAACAAATTGATGTT 3505 Query 325402 ATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCC 325461 |||||| || ||| ||||||| || | ||| || || ||| || | || ||||||| Sbjct 3504 ATTGCTGCCAACAAAATCCTGAGCCATGTTAACAATTGTCATATGTAACGAAACTTCGCC 3445 Query 325462 ATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTC 325518 ||| ||||| ||| | || || || |||| | || ||||| |||||||| || Sbjct 3444 ATGATGATAAGCGGTCATTTCAGCCACTGAACCACCCAATTGTGCCACCTTCACATC 3388 >seq87437 Length=6430 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || |||||||| || | ||| || ||||| |||||||||||||| || || Sbjct 490 TTCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAA 431 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || | ||||| || ||| || |||||||| ||||| || || || || || || Sbjct 430 TATTAAGCGCTGCTG---GTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAAC 374 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| || || || || ||||| || || || || || | || || Sbjct 373 ATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTT 314 Query 288459 GACGAATATCTGCATTATG 288477 ||||| ||||||||| || Sbjct 313 CACGAAAATCTGCATTTTG 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178219249783134