Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq18128 104 3e-17 seq67377 102 9e-17 seq18871 102 9e-17 >seq18128 Length=24892 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56994 TATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 || |||||| |||||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 9289 TACGAAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 9348 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| ||||||||||||||||||| Sbjct 9349 ATACTGACCACTATACTACCGAGGA 9373 >seq67377 Length=7354 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 6975 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 6916 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 6915 TGACCACTATACTACCGAGGA 6895 >seq18871 Length=4271 Score = 102 bits (112), Expect = 9e-17 Identities = 154/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 ||||| || || |||||||| || | ||||| |||||||||||||||| | || || Sbjct 2770 AAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGATAATGTGCGA 2828 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 |||| |||| ||| || ||||| || || | |||||||| || | ||| | | ||| Sbjct 2829 CCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCT 2888 Query 42111 TTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 |||||| ||| || ||| | | | | ||||| || ||||| || | || Sbjct 2889 TTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTT 2948 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || |||| ||| |||||||| || ||||| Sbjct 2949 ATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542568053937520