Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq18871 116 4e-21 seq87437 109 5e-19 seq47143 104 2e-17 >seq18871 Length=4271 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | || ||||| || || || Sbjct 2056 GTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCA 2115 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | |||||||| || || ||||| ||||| || ||||| | |||| ||||| Sbjct 2116 GCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTG-AATTTTCGCTTT 2174 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | |||||| ||| || ||||| | |||| || || || ||||| || Sbjct 2175 GACATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGT 2234 Query 64426 TTTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 2235 CTTCACGAAAATTTGCAT 2252 Score = 113 bits (124), Expect = 4e-20 Identities = 164/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||||||||| | | |||| ||| | ||||| || || ||||| |||||||| | Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAGAT 2819 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | ||| ||||| ||| |||| | ||||||||| || || ||| Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || ||||| || || | | || ||||| ||| || | ||| || | ||||| Sbjct 2880 ATACCCTCTTTGTCCTGGA-TCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCAC 2938 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | |||| || || || || || |||||||| ||||| ||||| Sbjct 2939 TTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | | || || ||||||| | || ||||| Sbjct 3018 GTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTGTTTGCCA 3077 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || || || || || |||||||||||||| || || |||||| ||| Sbjct 3078 GCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTGGATTTTTGCCTTA 3137 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||| ||| | || ||||| | ||| | || || || || |||||| Sbjct 3138 ACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGTTAAAGTT 3197 Query 64427 TTTACGAAAATTTGCATT 64444 || || || ||||||||| Sbjct 3198 TTCACAAATATTTGCATT 3215 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||||||| | || |||||||| ||||| || ||||| | | || || | ||| Sbjct 2548 AGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCT 2607 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| || || || |||| | ||| || || || || ||||| |||||||| || Sbjct 2608 TCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCC 2667 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTG-TATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| |||||| | || || |||| || ||||||| |||| || Sbjct 2668 TGAATTTTC-GCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGT 2726 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || |||||||| ||||||||||| Sbjct 2727 TTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 >seq87437 Length=6430 Score = 109 bits (120), Expect = 5e-19 Identities = 179/256 (70%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| || | | |||||||| | |||||||| || ||||| || ||||| Sbjct 525 CCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTT 466 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||| || | || || || ||| | || | ||||||||||| |||||| Sbjct 465 AACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGA 406 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || ||||| || ||| ||| ||| || | |||||| | || || Sbjct 405 ATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACC 346 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAAT-GAT 64455 || | || | || || || || || ||||| |||||||| |||||||| | ||| || Sbjct 345 TCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATTTTGACAATGGAG 286 Query 64456 ACACTTAATTGGTCCT 64471 | || ||||| |||| Sbjct 285 AAAC--AATTGATCCT 272 >seq47143 Length=13737 Score = 104 bits (114), Expect = 2e-17 Identities = 173/241 (72%), Gaps = 7/241 (3%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATC-TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATC-TG 64274 || ||||| || | |||| |||| ||| | ||| |||||||| ||||| || || || | Sbjct 814 CCACCGCGTAAACGTAAG-ACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATT 872 Query 64275 CGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAG 64334 | ||| | | | ||||| || || || ||||| | || | ||| || || || |||| Sbjct 873 CAACGTTCTTC-CATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAG 931 Query 64335 GAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT-GTATCACCGGCGTCC 64393 |||| ||||| || ||||| ||||| |||||| | | || | ||||| | || Sbjct 932 GAATACCTTCCTTATCTTGAATTTTC-GCTTTAACATTTTCAATCGTATCGGATGGCTCG 990 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATG 64453 ||||| | || | ||| || || || |||||||| || |||||||||||||| | |||| Sbjct 991 ACTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTGA-AATG 1049 Query 64454 A 64454 | Sbjct 1050 A 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499051765341320